Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00044197

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00044197SMapS_parentSequenceF55C9
IdentityVersion2
NameCGC_namefbxb-63Person_evidenceWBPerson655
Sequence_nameF55C9.13
Molecular_nameF55C9.13
F55C9.13.1
CE41911
Other_nameCELE_F55C9.13Accession_evidenceNDBBX284605
Public_namefbxb-63
DB_infoDatabaseWormFluxgeneWBGene00044197
NDBlocus_tagCELE_F55C9.13
PanthergeneCAEEL|WormBase=WBGene00044197|UniProtKB=Q564T6
familyPTHR22899
NCBIgene3565062
RefSeqproteinNM_001028813.3
TrEMBLUniProtAccQ564T6
UniProt_GCRPUniProtAccQ564T6
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Mar 2005 18:02:37WBPerson1846EventCreated
212 Dec 2005 17:22:20WBPerson2970Name_changeCGC_namefbxb-63
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxb
Allele (86)
RNASeq_FPKM (74)
OrthologWBGene00034924Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00041169Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00089092Caenorhabditis briggsaeFrom_analysisInparanoid_8
chrV_pilon.g17862Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (143)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalaaaala; ABalaaaarl; ABalaaaarr; NSM; and SMB based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by eleven chemicals including hydrogen sulfide; indole; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF55C9.13
Corresponding_CDS_historyF55C9.13:wp185
Corresponding_transcriptF55C9.13.1
Associated_featureWBsf653564
WBsf655615
Experimental_infoRNAi_resultWBRNAi00015722Inferred_automaticallyRNAi_primary
WBRNAi00019944Inferred_automaticallyRNAi_primary
Expr_patternExpr1018246
Expr1040197
Expr1152273
Expr2011664
Expr2029903
Microarray_results (16)
Expression_clusterWBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00040285:H2S_24hr_upregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045974:NSM_enriched_totalRNA_tiling
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050561:indole_10-fold_downregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053888:drh-3(rrr2)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056446:hsb-1(cg116)_upregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058678:DAF-12_upregulated_PVD
WBPaper00058948:PA14_upregulated
WBPaper00059117:B.subtilis_downregulated
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059224:tph-1(mg280)_upregulated
WBPaper00059334:sacy-1(depletion)_regulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00061340:ABarpaaa_lineage
WBPaper00061340:ADA_ADE_grandparent
WBPaper00061340:AIN_parent
WBPaper00061340:IL1_parent
WBPaper00061340:Neuroblast_AWC_SAAVx
WBPaper00061340:Parent_of_exc_gland_AVK
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:Parent_of_hyp3_ILsoDx
WBPaper00061340:RIC_parent
WBPaper00061340:RME_LR_parent
WBPaper00061340:SMB
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061527:sdz-10-fbxb-62
WBPaper00061952:daf-18(nr2037)_downregulated
WBPaper00062156:jmjd-5(zr1234)_updownregulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
WBPaper00064716:paraquat_upregulated
WBPaper00064999:miR-229-64-65-66_upregulated
WBPaper00065005:sams-3(RNAi)_upregulated
WBPaper00065005:sams-4(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066110:Cisplatin_downregulated_diploid
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_9
WBPaper00025032:cluster_9
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00032062:age_regulated_genes
WBPaper00034739:RIL17lessRIL14
WBPaper00034757:up_by_oxidative_stress
WBPaper00036123:Fluoranthene_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00048567:dnj-14_downregulated
WBPaper00056330:mrps-5(RNAi)_downregulated
[cgc5767]:cluster_7
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(101_min)
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SET
[cgc5767]:expression_class_SE_pi(53_min)
Map_infoMapVPosition20.9583Error0.006511
PositivePositive_cloneF55C9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene