WormBase Tree Display for Gene: WBGene00043187

WBGene00043187 SMap: S_parent: Sequence: C40H5
  Identity: Version: 3
    Name: CGC_name: nspa-9 Person_evidence: WBPerson1983
      Sequence_name: C40H5.1
      Molecular_name: C40H5.1
        C40H5.1.1
        CE08649
      Other_name: CELE_C40H5.1 Accession_evidence: NDB BX284606
      Public_name: nspa-9
    DB_info: Database: WormQTL gene WBGene00043187
        WormFlux gene WBGene00043187
        NDB locus_tag CELE_C40H5.1
        NCBI gene 183368
        RefSeq protein NM_077564.3
        TrEMBL UniProtAcc D0FY30
        UniProt_GCRP UniProtAcc D0FY30
    Species: Caenorhabditis elegans
    History: Version_change: 1 04 Oct 2004 10:58:09 WBPerson1971 Event: Created
                Killed
        2 01 Apr 2005 11:59:21 WBPerson1983 Event: Resurrected
        3 01 Apr 2005 11:59:21 WBPerson1983 Name_change: CGC_name: nspa-9
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspa
    Allele: WBVar01499887
      WBVar01499888
      WBVar01499710
      WBVar02145038
      WBVar01849574
      WBVar01498960
      WBVar01500067
    RNASeq_FPKM (74)
    Ortholog: WBGene00027402 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037775 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00087031 Caenorhabditis briggsae From_analysis: Inparanoid_8
    Paralog: WBGene00012294 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00013887 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00013888 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00044274 Caenorhabditis elegans From_analysis: Inparanoid_8
    Structured_description: Automated_description: Enriched in neurons based on microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on quantitative PCR; microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including hydrogen sulfide; resveratrol; and Acrylamide based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C40H5.1
    Corresponding_CDS_history: C40H5.1:wp119
    Corresponding_transcript: C40H5.1.1
    Associated_feature: WBsf648572
      WBsf1007100
      WBsf1007101
      WBsf1023929
  Experimental_info: RNAi_result: WBRNAi00042264 Inferred_automatically: RNAi_primary
      WBRNAi00011821 Inferred_automatically: RNAi_primary
      WBRNAi00012527 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024206
      Expr1146257
    Drives_construct: WBCnstr00023823
    Construct_product: WBCnstr00023823
    Microarray_results (17)
    Expression_cluster (69)
  Map_info: Map: X Position: 6.58837
    Positive: Positive_clone: C40H5 Inferred_automatically: From sequence, transcript, pseduogene data
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: The corresponding CDS object for this gene had been created and removed before WormBase introduced the concept of unique gene identifiers. This (dead) gene object exists as an attempt to make sure that a gene ID exists for every worm gene prediction that has ever existed. Curator_confirmed: WBPerson1971
    This gene has been resurrected because it appears to belong to a family of small peptides in C.elegans, annotated based on protein alignments with other family members. Curator_confirmed: WBPerson1983
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene