Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00041819

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00041819SMapS_parentSequencecb25.fpc4470
IdentityVersion2
NameCGC_nameCbr-fipr-1.2From_analysisInferred_from_orthology
Sequence_nameCBG23465
Molecular_nameCBG23465
CBG23465.1
CBP24473
Other_nameCBG_23465Accession_evidenceNDBHE601533
Public_nameCbr-fipr-1.2
DB_infoDatabaseNDBlocus_tagCBG_23465
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbr-fipr-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfipr
RNASeq_FPKMWBls:0000002109.513From_analysisRNASeq.briggsae.WBls:0000002.control_mean
114.733From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.5231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
200.283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
100.281From_analysisRNASeq.briggsae.WBls:0000002.control_mean
72.5865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
93.6598From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.742255From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.48451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.32327From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.4853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002717.9525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.5433From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.8567From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
28.8208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
175.831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
26.3388From_analysisRNASeq.briggsae.WBls:0000027.control_median
61.6152From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035161.699From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038143.089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
180.365From_analysisRNASeq.briggsae.WBls:0000038.control_median
193.435From_analysisRNASeq.briggsae.WBls:0000038.control_mean
217.64From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
27.8315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
385.179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.9381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
11.5823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
123.015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
13.2412From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.9001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
40.1089From_analysisRNASeq.briggsae.WBls:0000041.control_mean
113.578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
35.4159From_analysisRNASeq.briggsae.WBls:0000041.control_median
54.9909From_analysisRNASeq.briggsae.WBls:0000041.control_mean
55.9317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
59.7189From_analysisRNASeq.briggsae.WBls:0000063.control_mean
63.2936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
66.8349From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
84.1911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
84.2748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
31.7922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
55.0644From_analysisRNASeq.briggsae.WBls:0000063.control_mean
65.0642From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010163.2936From_analysisRNASeq.briggsae.total_over_all_stages.control_median
95.3716From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
43.8619From_analysisRNASeq.briggsae.total_over_all_stages.control_median
84.6837From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (26)
ParalogWBGene00041821Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00036911Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans fipr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23465
Corresponding_transcriptCBG23465.1
Experimental_infoExpr_patternExpr1060824
Microarray_resultsGPL8303_CB6_WBGene00041819_A
GPL8303_CB6_WBGene00041819_B
GPL14143_CBG23465_165-224_0.943_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene