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WormBase Tree Display for Gene: WBGene00041458

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Name Class

WBGene00041458SMapS_parentSequencecb25.fpc4426b
IdentityVersion2
NameCGC_nameCbr-sup-36From_analysisInferred_from_orthology
Sequence_nameCBG23027
Molecular_nameCBG23027
CBG23027.1
CBP45911
Other_nameCBG_23027Accession_evidenceNDBHE600964
Public_nameCbr-sup-36
DB_infoDatabaseNDBlocus_tagCBG_23027
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-sup-36
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsup
RNASeq_FPKMWBls:00000024.28409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.59503From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.61701From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.97192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.5152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.28347From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.84156From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003497.454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
544.546From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
591.638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
529.856From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
539.649From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004153.026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
161.793From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
170.56From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
103.967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
146.963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
178.736From_analysisRNASeq.briggsae.WBls:0000004.control_mean
319.163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.344073From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.530111From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.24626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.795166From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.891801From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.97687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.19339From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.78206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.1882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.10821From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.26511From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.34201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.12056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004120.1883From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.8489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
21.0923From_analysisRNASeq.briggsae.WBls:0000041.control_median
21.3357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
29.6867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.88201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.9929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.1185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
16.4837From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.4774From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000631.29226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.44315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.05133From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.78279From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.54046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.58677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.7959From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.60837From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.73627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.12056From_analysisRNASeq.briggsae.total_over_all_stages.control_median
53.8314From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.7165From_analysisRNASeq.briggsae.total_over_all_stages.control_median
71.1947From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (21)
ParalogWBGene00035630Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041437Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041438Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans sup-36. In C. elegans, sup-36 is involved in embryonic digestive tract development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23027
Corresponding_CDS_historyCBG23027:bp194
CBG23027:bp255
Corresponding_transcriptCBG23027.1
Other_sequenceCRC02597_1
CR01773
CRC08142_1
CR11423
Experimental_infoExpr_patternExpr1060561
Microarray_resultsGPL8303_CB6_WBGene00041458_A
GPL8303_CB6_WBGene00041458_B
GPL14143_CBG23027_337-396_0.913_21_A
MethodGene