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WormBase Tree Display for Gene: WBGene00037929

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Name Class

WBGene00037929SMapS_parentSequencecb25.fpc4095
IdentityVersion2
NameCGC_nameCbr-ddn-1.1From_analysisInferred_from_orthology
Sequence_nameCBG18529
Molecular_nameCBG18529
CBG18529.1
CBP19310
Other_nameCBG_18529Accession_evidenceNDBHE601508
Public_nameCbr-ddn-1.1
DB_infoDatabaseNDBlocus_tagCBG_18529
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-ddn-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classddn
RNASeq_FPKMWBls:000000210.5623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.8126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.8092From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.3947From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.24829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.1081From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.3109From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.30065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.411462From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.522273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.274308From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.158964From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.317929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.098108From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.172613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.109497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.454583From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.57724From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.16764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.811112From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.9882From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.22108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.14263From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.251397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.33642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.29206From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.05846From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.24771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.39831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004114.8509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.68701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.13981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.03903From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.93826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.40399From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.6912From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.277From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.6157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
15.9158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.63015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.86471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.84308From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.85871From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.06865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.88698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.95586From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.19951From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.90349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.06865From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.82263From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.15231From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.10351From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (35)
ParalogWBGene00037931Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00037933Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans ddn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18529
Corresponding_CDS_historyCBG18529:bp194
CBG18529:bp255
Corresponding_transcriptCBG18529.1
Other_sequenceFD515549.1
CSC01802_1
Experimental_infoExpr_patternExpr1050062
Microarray_resultsGPL8303_CB6_WBGene00037929_A
GPL14143_CBG18529_1128-1187_0.928_6_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene