Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00036542

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00036542SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-unc-86From_analysisInferred_from_orthology
Sequence_nameCBG16662
Molecular_nameCBG16662
CBG16662.1
CBP18728
Other_nameCBG_16662Accession_evidenceNDBHE600949
Public_nameCbr-unc-86
DB_infoDatabaseNDBlocus_tagCBG_16662
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-86
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000022.27412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.58336From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.09936From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.37661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.43556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.04641From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.18674From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000032.0485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.67166From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.29483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.14949From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.10515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000423.0535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
24.9779From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.9024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
24.2145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
27.0419From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.0499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
33.9891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.565556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.767659From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.9243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.41917From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.59805From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.42149From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.42845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.18698From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.619085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.54839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.90363From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.11175From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.25887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.02066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.169603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.315157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.378619From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.424196From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.442082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.769943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.603041From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.606013From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.780558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.1409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.121244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.198105From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.269749From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.37721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.652185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.287657From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.351837From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.76228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.0485From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.9135From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.15369From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.32626From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139941
00139942
00139943
OrthologWBGene00006818Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00054771Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00158628Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00118128Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00217665Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g5679Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1851Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11520Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16464Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g18925Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1764Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20335Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g146Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8217Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-86Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold78.g488Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00014.g941Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19673Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009775Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09391Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22052Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30231100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00228776Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8328Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00177265Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00244854Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261536Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286844Trichuris murisFrom_analysisWormBase-Compara
WBGene00295957Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00033471Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034846Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-86. In C. elegans, unc-86 is involved in mechanosensory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16662
Corresponding_CDS_historyCBG16662:bp194
CBG16662:bp255
Corresponding_transcriptCBG16662.1
Other_sequenceAcan_isotig06105
Dviv_isotig17894
Oden_isotig25490
Oden_isotig25565
Dviv_isotig17893
Acan_isotig06104
Dviv_isotig21248
XIC02391_1
XI03029
JI170316.1
Experimental_info (2)
MethodGene