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WormBase Tree Display for Gene: WBGene00032811

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Name Class

WBGene00032811SMapS_parentSequencecb25.fpc2587
IdentityVersion3
NameCGC_nameCbr-cdh-12From_analysisInferred_from_orthology
Sequence_nameCBG11734
Molecular_nameCBG11734a
CBG11734a.1
CBP38287
CBG11734b
CBP45279
CBG11734b.1
Other_nameCBG_11734Accession_evidenceNDBHE601289
CBG_11732
Public_nameCbr-cdh-12
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-cdh-12
331 Aug 2016 10:29:44WBPerson4025EventAcquires_mergeWBGene00032809
Acquires_mergeWBGene00032809
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdh
AlleleWBVar00013637
RNASeq_FPKMWBls:000000210.8405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.78888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.43774From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.68384From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.79371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.73877From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.27673From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.527798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.586671From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.645544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.712923From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.965428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.37985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.45404From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.52822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
3.23917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.64196From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.7415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.32107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.93954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.5923From_analysisRNASeq.briggsae.WBls:0000027.control_mean
61.9129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.92446From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.8677From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.69395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.80921From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003534.0838From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.1789From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.2642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.6555From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.44607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
33.8182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.09363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.145183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.277793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.324308From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.370823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.25409From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.22256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.875691From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.38056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.41657From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.10252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.06264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.07479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.26439From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.32257From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.40866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.45329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.360388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.11372From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.19868From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.93954From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.22608From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.2743From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.89881From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136169
00136170
00136171
Ortholog (23)
ParalogWBGene00023547Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031906Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032243Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035878Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036312Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037547Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041052Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042583Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00206398Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Is an ortholog of C. elegans cdh-12.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11734a
CBG11734b
Corresponding_CDS_historyCBG11734:bp219
CBG11734:bp255
Corresponding_transcriptCBG11734a.1
CBG11734b.1
Other_sequenceCRC02873_1
Oden_isotig09627
MI01118
JO469662.1
MI03938
JI163883.1
CR01213
Experimental_infoExpr_patternExpr1053984
Expr1059621
Expr1060655
Microarray_results (11)
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
MethodGene