WormBase Tree Display for Gene: WBGene00031378

WBGene00031378 SMap: S_parent: Sequence: cb25.fpc2234
  Identity: Version: 2
    Name: CGC_name: Cbr-clpf-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09862
      Molecular_name: CBG09862
        CBG09862.1
        CBP29108
      Other_name: CBG_09862 Accession_evidence: NDB HE601459
      Public_name: Cbr-clpf-1
    DB_info: Database: NDB locus_tag CBG_09862
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:10 WBPerson4025 Name_change: CGC_name: Cbr-clpf-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clpf
    RNASeq_FPKM: WBls:0000002 18.2108 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        21.3183 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        22.8211 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        28.9343 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        24.7989 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        25.1263 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        30.7323 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 86.3143 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        87.1248 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        87.9354 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        87.0159 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        87.0885 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 57.0121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        59.8772 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        62.7423 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        61.6119 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        62.5946 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        62.8155 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        62.8949 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.769793 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        13.6611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.48466 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        5.30518 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.85676 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        5.5361 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.22886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 8.29416 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.4876 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        13.0163 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        14.3807 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        23.4902 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        5.59992 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        8.59453 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 32.6355 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        43.2916 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        43.615 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        45.9576 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        48.6235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        49.9094 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        39.2375 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        44.2923 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        52.0564 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 18.4432 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        18.5479 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        25.9205 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        27.0663 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        27.0677 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        45.352 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        25.2876 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        25.604 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        26.7698 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 18.5479 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        27.3051 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        25.604 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        32.124 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00134897
    Ortholog (30)
    Paralog: WBGene00024956 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041921 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in mRNA 3'-end processing. Is an ortholog of C. elegans clpf-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09862
    Corresponding_CDS_history: CBG09862:bp194
    Corresponding_transcript: CBG09862.1
    Other_sequence (25)
  Experimental_info: Expr_pattern: Expr1053283
    Microarray_results: GPL8303_CB6_WBGene00031378_A
      GPL14143_CBG09862_586-645_0.901_19_A
      GPL14143_CBG09862_674-733_0.911_14_C
      GPL14143_CBG09862_734-793_0.920_9_B
  Method: Gene