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WormBase Tree Display for Gene: WBGene00030883

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Name Class

WBGene00030883SMapS_parentSequencecb25.fpc2220a
IdentityVersion3
NameCGC_nameCbr-fos-1From_analysisInferred_from_orthology
Sequence_nameCBG09268
Molecular_nameCBG09268a
CBG09268a.1
CBP48564
CBG09268b
CBP34052
CBG09268b.1
CBG09268b.2
Other_nameCBG_09268Accession_evidenceNDBHE600954
CBG_27127
Public_nameCbr-fos-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-fos-1
324 Nov 2017 12:02:54WBPerson4025EventAcquires_mergeWBGene00088541
Acquires_mergeWBGene00088541
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfos
RNASeq_FPKMWBls:000000220.5573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.509From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.9772From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.8652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.5842From_analysisRNASeq.briggsae.WBls:0000002.control_median
25.1477From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.6594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000032.30719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.82172From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.33624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
5.62447From_analysisRNASeq.briggsae.WBls:0000003.control_mean
9.22999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000416.1046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
17.3953From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
18.6859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
19.9262From_analysisRNASeq.briggsae.WBls:0000004.control_mean
20.6567From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
21.2747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
22.909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002718.2995From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
21.3642From_analysisRNASeq.briggsae.WBls:0000027.control_mean
38.2946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.49853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
135.689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
28.2971From_analysisRNASeq.briggsae.WBls:0000027.control_median
49.9454From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003546.6154From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.8058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
17.9414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
30.159From_analysisRNASeq.briggsae.WBls:0000038.control_median
38.3605From_analysisRNASeq.briggsae.WBls:0000038.control_mean
42.3766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
80.3181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004114.8512From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.2074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.38522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.25482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
9.40613From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.55745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.8457From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.3609From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
28.6267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006311.5326From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.8859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.7387From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
14.1169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
16.9217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
12.3306From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.9278From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.3204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010117.9414From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.739From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.6216From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.6035From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134310
00134311
00134312
00134313
Ortholog (25)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans fos-1. In C. elegans, fos-1 is involved in several processes, including determination of adult lifespan; negative regulation of stress response to copper ion; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09268a
CBG09268b
Corresponding_CDS_historyCBG09268:bp194
Corresponding_transcriptCBG09268a.1
CBG09268b.1
CBG09268b.2
Other_sequence (23)
Experimental_infoExpr_patternExpr1054551
Expr1061486
Microarray_resultsGPL8303_CB6_WBGene00030883_A
GPL14143_CBG09268_670-729_0.927_11_A
GPL14143_CBG09268_892-951_0.764_118_C
GPL14143_CBG09268_959-1018_0.558_198_B
GPL14143_CBG27127_94-153_0.959_4_A
MethodGene