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WormBase Tree Display for Gene: WBGene00030791

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Name Class

WBGene00030791SMapS_parentSequencecb25.fpc2193
IdentityVersion2
NameCGC_nameCbr-lgc-50From_analysisInferred_from_orthology
Sequence_nameCBG09141
Molecular_nameCBG09141
CBG09141.1
CBP45058
Other_nameCBG_09141Accession_evidenceNDBHE601302
Public_nameCbr-lgc-50
DB_infoDatabaseNDBlocus_tagCBG_09141
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:50WBPerson2970Name_changeCGC_nameCbr-lgc-50
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:000000210.169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.2651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.56189From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.66533From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.9807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.24417From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.9135From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.267356From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.534713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.729301From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.65319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.392713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.820131From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.24755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.27128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.808833From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.923913From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.20871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.449011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.09179From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.88441From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.11244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.0898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.60212From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.43576From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003512.8944From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.3482From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.1423From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.2098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.65083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
17.4572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.07481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004111.8604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.42852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.7632From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.09788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.8672From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.8577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.0296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.22602From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.47779From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000632.89224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.51442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.03277From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.26548From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.35046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.53753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.39816From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.54715From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.06153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.35046From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.23822From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.54715From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.8417From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134205
00134206
00134207
00134208
00134209
00134210
Contained_in_operonCBOPA0321
Ortholog (29)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-50.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09141
Corresponding_CDS_historyCBG09141:bp194
CBG09141:bp255
Corresponding_transcriptCBG09141.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1056571
Microarray_resultsGPL8303_CB6_WBGene00030791_A
GPL14143_CBG09141_243-302_0.868_22_B
GPL14143_CBG09141_456-515_0.842_35_A
GPL14143_CBG09141_909-968_0.874_18_C
MethodGene