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WormBase Tree Display for Gene: WBGene00029152

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Name Class

WBGene00029152SMapS_parentSequencecb25.fpc0305a
IdentityVersion2
NameCGC_nameCbr-etr-1From_analysisInferred_from_orthology
Sequence_nameCBG06972
Molecular_nameCBG06972
CBG06972.1
CBP44468
Other_nameCBG_06972Accession_evidenceNDBHE600960
Public_nameCbr-etr-1
DB_infoDatabaseNDBlocus_tagCBG_06972
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-etr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classetr
RNASeq_FPKMWBls:000000257.0775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
60.6907From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
62.3622From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.3183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
102.531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
65.0045From_analysisRNASeq.briggsae.WBls:0000002.control_median
72.4044From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000382.7684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
90.9581From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
99.1478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
84.3524From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
88.7562From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004103.003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
108.373From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
113.744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
103.076From_analysisRNASeq.briggsae.WBls:0000004.control_mean
126.871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
78.1207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
93.6427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002717.2304From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.8287From_analysisRNASeq.briggsae.WBls:0000027.control_mean
31.18From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.07576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
24.2052From_analysisRNASeq.briggsae.WBls:0000027.control_median
28.0328From_analysisRNASeq.briggsae.WBls:0000027.control_mean
58.6451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003583.8868From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.0626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
33.2262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
35.8859From_analysisRNASeq.briggsae.WBls:0000038.control_mean
38.7937From_analysisRNASeq.briggsae.WBls:0000038.control_median
44.3612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
50.8936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004136.3191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
73.6474From_analysisRNASeq.briggsae.WBls:0000041.control_mean
83.2135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
84.7533From_analysisRNASeq.briggsae.WBls:0000041.control_median
86.293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
88.7641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
41.8397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
43.4349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
63.3107From_analysisRNASeq.briggsae.WBls:0000041.control_mean
63.3242From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006326.9393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
28.4231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
33.3858From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.7353From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
34.2969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
43.5343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
34.0161From_analysisRNASeq.briggsae.WBls:0000063.control_median
34.5867From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.5911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010150.8936From_analysisRNASeq.briggsae.total_over_all_stages.control_median
53.4541From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
54.9911From_analysisRNASeq.briggsae.total_over_all_stages.control_median
58.4263From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132602
00132603
Ortholog (30)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans etr-1. In C. elegans, etr-1 is involved in determination of adult lifespan.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06972
Corresponding_CDS_historyCBG06972:bp194
CBG06972:bp255
Corresponding_transcriptCBG06972.1
Other_sequence (48)
Experimental_infoExpr_patternExpr1058850
Microarray_resultsGPL8303_CB6_WBGene00029152_A
GPL8303_CB6_WBGene00029152_B
GPL14143_CBG06972_1702-1761_0.803_1_B
GPL14143_CBG06972_1749-1808_0.744_68_C
GPL14143_CBG06972_1852-1911_0.798_9_A
MethodGene