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WormBase Tree Display for Gene: WBGene00027755

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Name Class

WBGene00027755SMapS_parentSequencecb25.fpc0106
IdentityVersion2
NameCGC_nameCbr-skr-19From_analysisInferred_from_orthology
Sequence_nameCBG05260
Molecular_nameCBG05260
CBG05260.1
CBP15307
Other_nameCBG_05260Accession_evidenceNDBHE601042
Public_nameCbr-skr-19
DB_infoDatabaseNDBlocus_tagCBG_05260
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-skr-19
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classskr
AlleleWBVar00110198
RNASeq_FPKMWBls:000000221.1799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.5226From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.6761From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.3257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.6211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
21.8512From_analysisRNASeq.briggsae.WBls:0000002.control_median
21.9123From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000321.9794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
28.7485From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
35.5176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
19.5785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
25.6918From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000423.3883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
24.8049From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.2215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
27.8583From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
28.186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
29.591From_analysisRNASeq.briggsae.WBls:0000004.control_mean
42.3011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.6251From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.5431From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.5468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.78548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.045From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.6066From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.5508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003541.1619From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.8168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
16.2777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
30.7303From_analysisRNASeq.briggsae.WBls:0000038.control_median
31.1604From_analysisRNASeq.briggsae.WBls:0000038.control_mean
45.1829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
47.364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004118.2367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
20.029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
22.1383From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.2477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
24.8801From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.0069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
27.8543From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.1765From_analysisRNASeq.briggsae.WBls:0000041.control_median
32.1052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
35.5002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006311.6569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.47639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.02512From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.39557From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.59673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
31.5773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.99615From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.45048From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010120.5468From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.3819From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
22.251From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.2198From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131203
Ortholog (15)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to be involved in ubiquitin-dependent protein catabolic process. Is an ortholog of C. elegans skr-19.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05260
Corresponding_CDS_historyCBG05260:bp194
Corresponding_transcriptCBG05260.1
Other_sequenceCBC02057_1
Experimental_infoExpr_patternExpr1057016
Microarray_resultsGPL8303_CB6_WBGene00027755_A
GPL8303_CB6_WBGene00027755_C
GPL8303_CB6_WBGene00027755_D
GPL8303_CB6_WBGene00027755_E
GPL14143_CBG05260_9-68_0.868_1_A
GPL14143_CBG05260_106-165_0.452_78_B
GPL14143_CBG05260_192-251_0.645_22_C
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene