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WormBase Tree Display for Gene: WBGene00024619

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Name Class

WBGene00024619SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-lipl-5From_analysisInferred_from_orthology
Sequence_nameCBG01370
Molecular_nameCBG01370
CBG01370.1
CBP00325
Other_nameCBG_01370Accession_evidenceNDBHE601256
Public_nameCbr-lipl-5
DB_infoDatabaseNDBlocus_tagCBG_01370
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-lipl-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlipl
AlleleWBVar00034389
WBVar00034404
WBVar00034394
WBVar00034399
RNASeq_FPKMWBls:000000225.7224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
25.8576From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
28.1024From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.7273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.5913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
25.79From_analysisRNASeq.briggsae.WBls:0000002.control_median
26.4746From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.896296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.941058From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.98582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.941878From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.943518From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.44563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.86425From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.28288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.91001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.03433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
3.09076From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.35272From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002719.6454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.2672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.07007From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.99422From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.25822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.66414From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.81022From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000358.37889From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.0487From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.8267From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.2492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
19.5819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.95956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.40417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.9423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
11.4838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.5391From_analysisRNASeq.briggsae.WBls:0000041.control_median
13.5944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
27.9911From_analysisRNASeq.briggsae.WBls:0000041.control_mean
75.9437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
115.887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
42.7146From_analysisRNASeq.briggsae.WBls:0000041.control_median
49.9477From_analysisRNASeq.briggsae.WBls:0000041.control_mean
71.8347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
42.7027From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.4666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
50.8737From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
56.1328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
61.0405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.4048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
35.9864From_analysisRNASeq.briggsae.WBls:0000063.control_mean
48.1702From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010113.5944From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.8853From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.1531From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.9113From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127969
00127970
Ortholog (28)
ParalogWBGene00031072Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00031836Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00026256Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027199Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038259Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038610Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303197Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity, acting on ester bonds. Predicted to be involved in lipid metabolic process. Is an ortholog of C. elegans lipl-5. In C. elegans, lipl-5 is involved in defense response to Gram-negative bacterium; lipid homeostasis; and triglyceride catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01370
Corresponding_CDS_historyCBG01370:bp194
Corresponding_transcriptCBG01370.1
Other_sequence (45)
Experimental_infoExpr_patternExpr1067736
Microarray_resultsGPL8303_CB6_WBGene00024619_A
GPL14143_CBG01370_846-905_0.800_54_C
GPL14143_CBG01370_965-1024_0.958_1_A
GPL14143_CBG01370_1160-1219_0.929_8_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene