WormBase Tree Display for Gene: WBGene00023498

WBGene00023498 SMap: S_parent: Sequence: ZK678
  Identity: Version: 2
    Name: CGC_name: lin-15A Person_evidence: WBPerson261
      Sequence_name: ZK678.1
      Molecular_name: ZK678.1
        ZK678.1.1
        CE15383
      Other_name: lin-15 CGC_data_submission
        CELE_ZK678.1 Accession_evidence: NDB BX284606
      Public_name: lin-15A
    DB_info: Database: AceView gene XQ353
        WormQTL gene WBGene00023498
        SignaLink protein WBGene00023498
        WormFlux gene WBGene00023498
        NDB locus_tag CELE_ZK678.1
        NCBI gene 181663
        RefSeq protein NM_078187.8
        SwissProt UniProtAcc Q27365
        TREEFAM TREEFAM_ID TF336904
        UniProt_GCRP UniProtAcc Q27365
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 24 Aug 2004 16:05:45 WBPerson1971 Event: Split_from: WBGene00003004
      Split_from: WBGene00003004
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: ZK678.1
    Corresponding_transcript: ZK678.1.1
    Other_sequence: BE239237.1
      OVC06601_1
    Associated_feature: WBsf236809
      WBsf236810
  Experimental_info: RNAi_result (47)
    Expr_pattern: Expr13101
      Expr1026271
      Expr1040141
      Expr1163064
      Expr2013161
      Expr2031393
    Drives_construct: WBCnstr00023854
    Construct_product: WBCnstr00016646
      WBCnstr00019445
      WBCnstr00019587
      WBCnstr00019645
      WBCnstr00020631
      WBCnstr00023854
    Antibody: WBAntibody00002219
      WBAntibody00002253
    Microarray_results (18)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
      WBPaper00044736:flat_dev_expression
      WBPaper00045861:set-2(ok952)_upregulated
      WBPaper00046509:lin-35(n745)_upregulated
      WBPaper00046805:csr-1(RNAi)_downregulated_Set1
      WBPaper00048988:neuron_expressed
      WBPaper00050094:glp-1(gf)_upregulated
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050094:mes-6(bn66)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051305:vit-2(ac3)_upregulated
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00058691:set-2(bn129)_downregulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060224:atf-6(ok551)_downregulated
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060871:M.humicola-extract_1h_regulated
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061340:IL1_parent
      WBPaper00061340:RMED
      WBPaper00061478:pie-1(ne4433)_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:nrde-3-tra-4_10484
      WBPaper00061651:ADF_enriched
      WBPaper00061651:AIN_enriched
      WBPaper00061651:AIY_enriched
      WBPaper00061651:CAN_enriched
      WBPaper00061651:DA_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DB_enriched
      WBPaper00061651:I1_enriched
      WBPaper00061651:VA12_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB_enriched
      WBPaper00062056:lin-15B(n744)_upregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-3(bn199)_upregulated_PGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_PGCs
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065149:lin-52(n771)_upregulated
      WBPaper00065158:25C_vs_15C_upregulated_WholeAnimal
      WBPaper00065158:AFD_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066085:hda-3(ok1991)_upregulated
      WBPaper00066085:sin-3(syb2172)_upregulated
      WBPaper00066110:Doxorubicin_downregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_9
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00024671:AFD_vs_AWB_upregulated
      WBPaper00025032:cluster_162
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00028483:Up_mes-4_vs_WT
      WBPaper00032165:differentially_expressed_with_age_medoid_1
      WBPaper00035227:heat_shock_regulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_F
      WBPaper00041002:HF_11d_2.0mM_Up
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00056330:mrps-5(RNAi)_downregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(143_min)
      [cgc5767]:expression_class_E_pi(66_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    Interaction (321)
  Map_info: Map: X Position: 22.9459 Error: 0.001185
    Well_ordered
    Positive: Positive_clone: PS#74B3
        ZK678 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 4458
        4457
        6060
        7015
        7082
      Multi_point: 5356
      Pos_neg_data: 4461
        491
        518
        519
        536
    Landmark_gene
  Reference (300)
  Remark: To properly reflect that this locus encodes two distinct products, this gene was created from the former lin-15 gene on the advice of the CGC. [krb 040824]
  Method: Gene