WormBase Tree Display for Gene: WBGene00023067
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| WBGene00023067 | SMap | S_parent | Sequence | F54D7 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | CGC_name | rpl-41.1 | Person_evidence | WBPerson4025 | ||||||
| Sequence_name | F54D7.6 | |||||||||
| Molecular_name | F54D7.6 | |||||||||
| F54D7.6.1 | ||||||||||
| CE26932 | ||||||||||
| Other_name | CELE_F54D7.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | rpl-41.1 | |||||||||
| DB_info | Database | WormQTL | gene | WBGene00023067 | ||||||
| NDB | locus_tag | CELE_F54D7.6 | ||||||||
| NCBI | gene | 172094 | ||||||||
| RefSeq | protein | NM_001383003.2 | ||||||||
| TrEMBL | UniProtAcc | A0A0M6VD87 | ||||||||
| UniProt_GCRP | UniProtAcc | A0A0M6VD87 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:39:11 | WBPerson1971 | Event | Imported | Initial conversion from Transcript class of WS125 | |||
| 2 | 27 Jun 2008 10:06:03 | WBPerson1867 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 02 Oct 2015 11:36:38 | WBPerson2970 | Name_change | CGC_name | rpl-41.1 | |||||
| 4 | 02 Oct 2015 13:23:19 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | rpl | |||||||||
| Allele (11) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00001691 | |||||||||
| 00001692 | ||||||||||
| 00001693 | ||||||||||
| 00126853 | ||||||||||
| 00126854 | ||||||||||
| 00126855 | ||||||||||
| Contained_in_operon | CEOP1917 | |||||||||
| Paralog | WBGene00005324 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of ribonucleoprotein complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | F54D7.6 | ||||||||
| Corresponding_CDS_history | F54D7.6:wp112 | |||||||||
| Corresponding_transcript | F54D7.6.1 | |||||||||
| Corresponding_transcript_history | F54D7.6:wp192 | |||||||||
| Corresponding_pseudogene_history | F54D7.6:wp250 | |||||||||
| Other_sequence (65) | ||||||||||
| Associated_feature | WBsf643242 | |||||||||
| WBsf643243 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00048321 | Inferred_automatically | RNAi_primary | ||||||
| Expr_pattern | Expr2015474 | |||||||||
| Expr2033709 | ||||||||||
| Microarray_results | 171920_x_at | |||||||||
| 194196_x_at | ||||||||||
| A_12_P109933 | ||||||||||
| GPL9450_F54D7.6 | ||||||||||
| cea2.d.27956 | ||||||||||
| Expression_cluster (80) | ||||||||||
| Map_info | Map | I | Position | -0.732698 | ||||||
| Positive | Positive_clone | F54D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
