WormBase Tree Display for Gene: WBGene00022888
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| WBGene00022888 | SMap | S_parent | Sequence | ZK1290 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rnh-1.1 | Paper_evidence | WBPaper00027023 | |||||
| Sequence_name | ZK1290.6 | ||||||||
| Molecular_name | ZK1290.6 | ||||||||
| ZK1290.6.1 | |||||||||
| CE36069 | |||||||||
| Other_name | CELE_ZK1290.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rnh-1.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Mar 2006 09:56:26 | WBPerson2970 | Name_change | CGC_name | rnh-1.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rnh | ||||||||
| Allele | WBVar00744575 | ||||||||
| WBVar00744576 | |||||||||
| WBVar00744577 | |||||||||
| WBVar01499702 | |||||||||
| WBVar00744578 | |||||||||
| WBVar00744579 | |||||||||
| WBVar00744580 | |||||||||
| WBVar00744581 | |||||||||
| WBVar00744582 | |||||||||
| WBVar00744583 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00259681 | |||||||||
| WBVar01949158 | |||||||||
| WBVar00173460 | |||||||||
| WBVar01438487 | |||||||||
| WBVar01400171 | |||||||||
| WBVar01307951 | |||||||||
| WBVar01666182 | |||||||||
| WBVar00068464 | |||||||||
| WBVar00370303 | |||||||||
| WBVar00370304 | |||||||||
| WBVar00370305 | |||||||||
| WBVar00370306 | |||||||||
| WBVar00370307 | |||||||||
| WBVar01498940 | |||||||||
| WBVar00370308 | |||||||||
| WBVar00370309 | |||||||||
| WBVar01498772 | |||||||||
| WBVar00744571 | |||||||||
| WBVar00744572 | |||||||||
| WBVar00744573 | |||||||||
| WBVar00744574 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00055210 | ||||||||
| 00055211 | |||||||||
| 00055212 | |||||||||
| 00126851 | |||||||||
| 00126852 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00004382 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007303 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010787 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011664 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | rnh-1.1 is one of four C. elegans genes that can encode an RNase H ribonuclease; when expressed in vitro, RNH-1.1 exhibits RNase H activity; rnh-1.1 transcripts are expressed from the L3 larval stage through adulthood. | Paper_evidence | WBPaper00027023 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Feb 2014 00:00:00 | ||||||||
| Automated_description | Enables RNA-DNA hybrid ribonuclease activity. Predicted to be involved in DNA replication, removal of RNA primer. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1290.6 | |||||||
| Corresponding_CDS_history | ZK1290.6a:wp112 | ||||||||
| ZK1290.6b:wp114 | |||||||||
| Corresponding_transcript | ZK1290.6.1 | ||||||||
| Other_sequence | Oden_isotig14869 | ||||||||
| EX547816.1 | |||||||||
| Dviv_isotig23460 | |||||||||
| Oden_isotig14868 | |||||||||
| ACC19014_1 | |||||||||
| Tcol_isotig14970 | |||||||||
| Acan_isotig02642 | |||||||||
| Associated_feature | WBsf221600 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00059215 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038196 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021868 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002023 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011029 | ||||||||
| Expr1162634 | |||||||||
| Expr2015386 | |||||||||
| Expr2033620 | |||||||||
| Drives_construct | WBCnstr00023892 | ||||||||
| Construct_product | WBCnstr00023892 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction | WBInteraction000323076 | ||||||||
| WBInteraction000401810 | |||||||||
| Map_info | Map | II | Position | 0.503598 | Error | 2.2e-05 | |||
| Positive | Positive_clone | ZK1290 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005577 | ||||||||
| WBPaper00027023 | |||||||||
| Remark | ZK1290.6 published as rnh-1.2 | Paper_evidence | WBPaper00005577 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
