WormBase Tree Display for Gene: WBGene00022882
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| WBGene00022882 | SMap | S_parent | Sequence | ZK1248 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gtap-1 | Person_evidence | WBPerson634 | |||||
| Sequence_name | ZK1248.13 | ||||||||
| Molecular_name | ZK1248.13 | ||||||||
| ZK1248.13.1 | |||||||||
| CE41604 | |||||||||
| Other_name | CELE_ZK1248.13 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gtap-1 | ||||||||
| DB_info | Database | AceView | gene | 2G120 | |||||
| WormQTL | gene | WBGene00022882 | |||||||
| WormFlux | gene | WBGene00022882 | |||||||
| NDB | locus_tag | CELE_ZK1248.13 | |||||||
| NCBI | gene | 173988 | |||||||
| RefSeq | protein | NM_062757.7 | |||||||
| TREEFAM | TREEFAM_ID | TF321115 | |||||||
| TrEMBL | UniProtAcc | Q23421 | |||||||
| UniProt_GCRP | UniProtAcc | Q23421 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Aug 2020 17:10:42 | WBPerson1983 | Name_change | CGC_name | gtap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gtap | ||||||||
| Allele (55) | |||||||||
| Strain | WBStrain00036112 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2224 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalppppaa; ABplpppaapa; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by nine chemicals including manganese chloride; Zidovudine; and antimycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1248.13 | |||||||
| Corresponding_CDS_history | ZK1248.13:wp94 | ||||||||
| ZK1248.13:wp182 | |||||||||
| Corresponding_transcript | ZK1248.13.1 | ||||||||
| Other_sequence | CR11758 | ||||||||
| CBC12415_1 | |||||||||
| CBC03666_1 | |||||||||
| CJC03839_1 | |||||||||
| CRC10531_1 | |||||||||
| CJC05622_1 | |||||||||
| Associated_feature | WBsf665559 | ||||||||
| WBsf665560 | |||||||||
| WBsf223105 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1014074 | ||||||||
| Expr1040122 | |||||||||
| Expr1162602 | |||||||||
| Expr2008738 | |||||||||
| Expr2026973 | |||||||||
| Drives_construct | WBCnstr00023897 | ||||||||
| Construct_product | WBCnstr00023897 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | II | Position | -0.894749 | |||||
| Positive | Positive_clone | ZK1248 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
