WormBase Tree Display for Gene: WBGene00022882

WBGene00022882 SMap: S_parent: Sequence: ZK1248
  Identity: Version: 2
    Name: CGC_name: gtap-1 Person_evidence: WBPerson634
      Sequence_name: ZK1248.13
      Molecular_name: ZK1248.13
        ZK1248.13.1
        CE41604
      Other_name: CELE_ZK1248.13 Accession_evidence: NDB BX284602
      Public_name: gtap-1
    DB_info: Database: AceView gene 2G120
        WormQTL gene WBGene00022882
        WormFlux gene WBGene00022882
        NDB locus_tag CELE_ZK1248.13
        NCBI gene 173988
        RefSeq protein NM_062757.7
        TREEFAM TREEFAM_ID TF321115
        TrEMBL UniProtAcc Q23421
        UniProt_GCRP UniProtAcc Q23421
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Aug 2020 17:10:42 WBPerson1983 Name_change: CGC_name: gtap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gtap
    Allele (55)
    Strain: WBStrain00036112
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP2224
    Ortholog: WBGene00057277 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00144058 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191974 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00140933 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140632 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00124208 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00057275 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00025553 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      CBOVI.g12584 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g12586 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3226 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5514 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g5516 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15204 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g15206 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12318 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g12320 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g19627 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22114 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g22116 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9692 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g9694 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8502 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8504 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g3545 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7044 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g7046 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-ZK1248.13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_II.g6266 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19421 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03168.g29286 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03168.g29288 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_006129 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_006131 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20117410 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4623 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrII_pilon.g4625 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalppppaa; ABplpppaapa; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by nine chemicals including manganese chloride; Zidovudine; and antimycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1248.13
    Corresponding_CDS_history: ZK1248.13:wp94
      ZK1248.13:wp182
    Corresponding_transcript: ZK1248.13.1
    Other_sequence: CR11758
      CBC12415_1
      CBC03666_1
      CJC03839_1
      CRC10531_1
      CJC05622_1
    Associated_feature: WBsf665559
      WBsf665560
      WBsf223105
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1014074
      Expr1040122
      Expr1162602
      Expr2008738
      Expr2026973
    Drives_construct: WBCnstr00023897
    Construct_product: WBCnstr00023897
    Microarray_results (26)
    Expression_cluster (106)
    Interaction (24)
  Map_info: Map: II Position: -0.894749
    Positive: Positive_clone: ZK1248 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene