WormBase Tree Display for Gene: WBGene00022847
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| WBGene00022847 | SMap | S_parent | Sequence | ZK1055 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK1055.6 | |||||||
| Molecular_name | ZK1055.6a | ||||||||
| ZK1055.6a.1 | |||||||||
| CE18475 | |||||||||
| ZK1055.6b | |||||||||
| CE29154 | |||||||||
| ZK1055.6c | |||||||||
| CE31138 | |||||||||
| ZK1055.6a.2 | |||||||||
| ZK1055.6b.1 | |||||||||
| ZK1055.6c.1 | |||||||||
| Other_name | CELE_ZK1055.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ZK1055.6 | ||||||||
| DB_info | Database | AceView | gene | 5H80 | |||||
| WormQTL | gene | WBGene00022847 | |||||||
| WormFlux | gene | WBGene00022847 | |||||||
| NDB | locus_tag | CELE_ZK1055.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022847|UniProtKB=H2KZM0 | |||||||
| family | PTHR31005 | ||||||||
| NCBI | gene | 179050 | |||||||
| RefSeq | protein | NM_171474.5 | |||||||
| NM_001383324.1 | |||||||||
| NM_072277.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF316116 | |||||||
| TrEMBL | UniProtAcc | H2KZM0 | |||||||
| Q8MXF9 | |||||||||
| H2KZL9 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZM0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5124 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00011557 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00016877 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018145 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022848 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in AVA; coelomocyte; intestine; sensory neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including aldicarb; methylmercuric chloride; and Zidovudine based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF4139; N-terminal domain of unknown function (DUF4140); Domain of unknown function (DUF4139); Domain of unknown function DUF4140; and Conserved hypothetical protein CHP02231. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1055.6a | |||||||
| ZK1055.6b | |||||||||
| ZK1055.6c | |||||||||
| Corresponding_transcript | ZK1055.6a.1 | ||||||||
| ZK1055.6a.2 | |||||||||
| ZK1055.6b.1 | |||||||||
| ZK1055.6c.1 | |||||||||
| Other_sequence | XIC03073_1 | ||||||||
| XI00363 | |||||||||
| FC553338.1 | |||||||||
| Associated_feature | WBsf669063 | ||||||||
| WBsf1000313 | |||||||||
| WBsf1019830 | |||||||||
| WBsf233830 | |||||||||
| WBsf233831 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038130 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059079 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064155 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019015 | ||||||||
| Expr1162510 | |||||||||
| Expr2008692 | |||||||||
| Expr2026926 | |||||||||
| Drives_construct | WBCnstr00023925 | ||||||||
| Construct_product | WBCnstr00023925 | ||||||||
| Microarray_results | SMD_ZK1055.6 | ||||||||
| SMD_ZK1055.6:2 | |||||||||
| 185069_s_at | |||||||||
| A_12_P105599 | |||||||||
| A_12_P117846 | |||||||||
| A_12_P144710 | |||||||||
| A_12_P144711 | |||||||||
| A_12_P144712 | |||||||||
| GPL13394_WBGene00022847 | |||||||||
| GPL13914_ZK1055.6 | |||||||||
| GPL14144_ZK1055.6b_1295-1354_0.912_14_B | |||||||||
| GPL14144_ZK1055.6b_1431-1490_0.955_1_A | |||||||||
| GPL14144_ZK1055.6b_995-1054_0.914_13_C | |||||||||
| GPL19516_CGZ0056179 | |||||||||
| GPL19516_CGZ0056180 | |||||||||
| GPL19516_CGZ0056181 | |||||||||
| GPL21109_ZK1055.6a | |||||||||
| GPL21109_ZK1055.6c | |||||||||
| GPL3518_CE18475 | |||||||||
| GPL3518_CE31138 | |||||||||
| GPL8304_CE_WBGene00022847_A | |||||||||
| GPL8673_ZK1055_6aP00449 | |||||||||
| GPL8673_ZK1055_6aP01166 | |||||||||
| GPL8673_ZK1055_6aP01484 | |||||||||
| GPL8673_ZK1055_6bP00548 | |||||||||
| GPL8673_ZK1055_6bP01265 | |||||||||
| GPL8673_ZK1055_6bP01583 | |||||||||
| GPL8673_ZK1055_6cP00005 | |||||||||
| GPL8673_ZK1055_6cP00019 | |||||||||
| GPL8673_ZK1055_6cP00027 | |||||||||
| GPL9450_ZK1055.6a | |||||||||
| GPL9450_ZK1055.6b | |||||||||
| cea2.3.31044 | |||||||||
| cea2.d.07499 | |||||||||
| cea2.d.48175 | |||||||||
| Expression_cluster (226) | |||||||||
| Map_info | Positive | Positive_clone | ZK1055 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.109727 | |||||||
| Method | Gene |
