WormBase Tree Display for Gene: WBGene00022783
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| WBGene00022783 | SMap | S_parent | Sequence | ZK652 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tomm-7 | Paper_evidence | WBPaper00024877 | |||||
| Person_evidence | WBPerson359 | ||||||||
| WBPerson2173 | |||||||||
| Sequence_name | ZK652.2 | ||||||||
| Molecular_name | ZK652.2 | ||||||||
| ZK652.2.1 | |||||||||
| CE00448 | |||||||||
| Other_name | CELE_ZK652.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tomm-7 | ||||||||
| DB_info | Database | AceView | gene | 3I951 | |||||
| WormQTL | gene | WBGene00022783 | |||||||
| WormFlux | gene | WBGene00022783 | |||||||
| NDB | locus_tag | CELE_ZK652.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022783|UniProtKB=P34660 | |||||||
| family | PTHR46722 | ||||||||
| NCBI | gene | 176101 | |||||||
| RefSeq | protein | NM_066305.6 | |||||||
| SwissProt | UniProtAcc | P34660 | |||||||
| TREEFAM | TREEFAM_ID | TF106199 | |||||||
| UniProt_GCRP | UniProtAcc | P34660 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Nov 2004 09:50:43 | WBPerson2970 | Name_change | CGC_name | tomm-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tomm | ||||||||
| Allele | WBVar01500260 | ||||||||
| WBVar00256735 | |||||||||
| WBVar01499774 | |||||||||
| WBVar01446908 | |||||||||
| WBVar00841435 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043816 | ||||||||
| 00043817 | |||||||||
| 00043818 | |||||||||
| 00043819 | |||||||||
| 00043820 | |||||||||
| 00043821 | |||||||||
| 00043822 | |||||||||
| 00043823 | |||||||||
| 00126761 | |||||||||
| 00126762 | |||||||||
| Contained_in_operon | CEOP3460 | ||||||||
| Ortholog (13) | |||||||||
| Structured_description | Concise_description | tomm-7 encodes the C. elegans member of the Tom7 family of mitochondrial import proteins; TOMM-7 activity is required for normal mitochondrial morphology. | Paper_evidence | WBPaper00024877 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 20 Jul 2011 00:00:00 | ||||||||
| Automated_description | Involved in mitochondrion organization. Predicted to be located in mitochondrial outer membrane. Predicted to be part of mitochondrial outer membrane translocase complex. Expressed in intestine and pharynx. Is an ortholog of human TOMM7 (translocase of outer mitochondrial membrane 7). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK652.2 | |||||||
| Corresponding_transcript | ZK652.2.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf976235 | ||||||||
| WBsf981515 | |||||||||
| WBsf225288 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Chronogram1205 | ||||||||
| Expr7239 | |||||||||
| Expr1025646 | |||||||||
| Expr1040075 | |||||||||
| Expr1163021 | |||||||||
| Expr2017456 | |||||||||
| Expr2035595 | |||||||||
| Drives_construct | WBCnstr00003319 | ||||||||
| WBCnstr00023979 | |||||||||
| Construct_product | WBCnstr00021652 | ||||||||
| WBCnstr00023979 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (118) | |||||||||
| SAGE_tag | SAGE:agtcttctct | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:gcggaaagagggaggat | Strand | Antisense | |||||||
| SAGE:gcggaaagag | Strand | Antisense | |||||||
| SAGE:agtcttctctggggata | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | III | Position | -0.540143 | Error | 0.000768 | |||
| Positive | Positive_clone | ZK652 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024877 | ||||||||
| WBPaper00026571 | |||||||||
| WBPaper00034662 | |||||||||
| WBPaper00036249 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055018 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
