WormBase Tree Display for Gene: WBGene00022703

WBGene00022703 SMap: S_parent: Sequence: ZK353
  Identity: Version: 2
    Name: CGC_name: ubxn-4 Person_evidence: WBPerson2838
            WBPerson4369
      Sequence_name: ZK353.8
      Molecular_name: ZK353.8
        ZK353.8.1
        CE00392
        ZK353.8.2
      Other_name: CELE_ZK353.8 Accession_evidence: NDB BX284603
      Public_name: ubxn-4
    DB_info: Database: AceView gene 3J494
        WormQTL gene WBGene00022703
        WormFlux gene WBGene00022703
        NDB locus_tag CELE_ZK353.8
        Panther gene CAEEL|WormBase=WBGene00022703|UniProtKB=P34631
          family PTHR46424
        NCBI gene 176187
        RefSeq protein NM_001382940.2
        SwissProt UniProtAcc P34631
        TREEFAM TREEFAM_ID TF317466
        UniProt_GCRP UniProtAcc P34631
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 Jan 2006 11:22:20 WBPerson2970 Name_change: CGC_name: ubxn-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ubxn
    Allele (28)
    Strain: WBStrain00033108
    RNASeq_FPKM (74)
    GO_annotation: 00043606
      00043607
      00043608
      00043609
      00043610
      00043611
      00043612
      00043613
      00043614
    Contained_in_operon: CEOP3520
    Ortholog (27)
    Paralog: WBGene00017733 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: ubxn-4 encodes one of six C. elegans UBX (ubiquitin regulatory X) domain-containing proteins. Paper_evidence: WBPaper00029386
            WBPaper00037734
          Curator_confirmed: WBPerson1843
          Date_last_updated: 05 Apr 2011 00:00:00
      Automated_description: Involved in positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress and ubiquitin-dependent ERAD pathway. Predicted to be located in endoplasmic reticulum. Is an ortholog of human UBXN4 (UBX domain protein 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK353.8
    Corresponding_transcript: ZK353.8.1
      ZK353.8.2
    Other_sequence (14)
    Associated_feature: WBsf651271
      WBsf993332
      WBsf227133
      WBsf227134
  Experimental_info: RNAi_result: WBRNAi00033364 Inferred_automatically: RNAi_primary
      WBRNAi00078144 Inferred_automatically: RNAi_primary
      WBRNAi00059356 Inferred_automatically: RNAi_primary
      WBRNAi00062489 Inferred_automatically: RNAi_primary
      WBRNAi00021962 Inferred_automatically: RNAi_primary
      WBRNAi00093226 Inferred_automatically: RNAi_primary
      WBRNAi00093228 Inferred_automatically: RNAi_primary
      WBRNAi00005455 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4669
      Expr4676
      Expr1010262
      Expr1040037
      Expr1162784
      Expr2017733
      Expr2035871
    Drives_construct: WBCnstr00012164
      WBCnstr00024039
    Construct_product: WBCnstr00012164
      WBCnstr00024039
    Microarray_results (20)
    Expression_cluster (103)
    Interaction (71)
    WBProcess: WBbiopr:00000076
  Map_info: Map: III Position: -0.266394 Error: 0.000908
    Positive: Positive_clone: ZK353 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00029386
    WBPaper00035294
    WBPaper00037734
    WBPaper00038491
    WBPaper00055090
    WBPaper00060756
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene