WormBase Tree Display for Gene: WBGene00022678
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| WBGene00022678 | SMap | S_parent | Sequence | ZK180 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sar-1 | Paper_evidence | WBPaper00031857 | |||||
| Sequence_name | ZK180.4 | ||||||||
| Molecular_name | ZK180.4 | ||||||||
| ZK180.4.1 | |||||||||
| CE07622 | |||||||||
| Other_name | CELE_ZK180.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | sar-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Aug 2008 16:49:32 | WBPerson2970 | Name_change | CGC_name | sar-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sar | ||||||||
| Allele (23) | |||||||||
| Strain | WBStrain00037545 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Contained_in_operon | CEOP4124 | ||||||||
| Ortholog (38) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activity. Involved in embryo development. Predicted to be located in endoplasmic reticulum exit site. Predicted to be part of COPII vesicle coat. Human ortholog(s) of this gene implicated in chylomicron retention disease. Is an ortholog of human SAR1A (secretion associated Ras related GTPase 1A) and SAR1B (secretion associated Ras related GTPase 1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060357 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10535) | ||||
| Molecular_info | Corresponding_CDS | ZK180.4 | |||||||
| Corresponding_transcript | ZK180.4.1 | ||||||||
| Other_sequence (144) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1015432 | ||||||||
| Expr1040022 | |||||||||
| Expr1162692 | |||||||||
| Expr2015596 | |||||||||
| Expr2033831 | |||||||||
| Drives_construct | WBCnstr00024059 | ||||||||
| Construct_product | WBCnstr00024059 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (111) | |||||||||
| Map_info | Map | IV | Position | 0.447421 | Error | 0.013819 | |||
| Positive | Positive_clone | ZK180 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025163 | ||||||||
| WBPaper00027296 | |||||||||
| WBPaper00031857 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00050029 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060970 | |||||||||
| WBPaper00064057 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
