WormBase Tree Display for Gene: WBGene00022608
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| WBGene00022608 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | madf-9 | Person_evidence | WBPerson260 | |||||
| WBPerson1997 | |||||||||
| Sequence_name | ZC416.1 | ||||||||
| Molecular_name | ZC416.1 | ||||||||
| ZC416.1.1 | |||||||||
| CE48878 | |||||||||
| Other_name | CELE_ZC416.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | madf-9 | ||||||||
| DB_info | Database | AceView | gene | 4E403 | |||||
| WormQTL | gene | WBGene00022608 | |||||||
| WormFlux | gene | WBGene00022608 | |||||||
| NDB | locus_tag | CELE_ZC416.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022608|UniProtKB=H2KZH8 | |||||||
| family | PTHR12243 | ||||||||
| NCBI | gene | 191167 | |||||||
| RefSeq | protein | NM_067988.4 | |||||||
| TrEMBL | UniProtAcc | H2KZH8 | |||||||
| UniProt_GCRP | UniProtAcc | H2KZH8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 May 2011 14:01:04 | WBPerson2970 | Name_change | CGC_name | madf-9 | ||||
| 3 | 27 Sep 2013 10:35:05 | WBPerson4025 | Event | Acquires_merge | WBGene00016986 | ||||
| Acquires_merge | WBGene00016986 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | madf | ||||||||
| Allele (99) | |||||||||
| Strain | WBStrain00052070 | ||||||||
| WBStrain00051954 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022294 | ||||||||
| 00022295 | |||||||||
| 00022296 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00007242 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00008118 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009461 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011575 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013717 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019218 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription regulator complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC416.1 | |||||||
| Corresponding_CDS_history | ZC416.1:wp239 | ||||||||
| Corresponding_transcript | ZC416.1.1 | ||||||||
| Other_sequence | ES413270.1 | ||||||||
| CBC08186_1 | |||||||||
| Tcol_isotig16679 | |||||||||
| Tcir_isotig31829 | |||||||||
| HBC09251_1 | |||||||||
| PPC20808_1 | |||||||||
| EX009188.1 | |||||||||
| Hbac_isotig03309 | |||||||||
| Dviv_isotig33521 | |||||||||
| Oden_isotig20984 | |||||||||
| Associated_feature | WBsf645881 | ||||||||
| WBsf978432 | |||||||||
| WBsf981722 | |||||||||
| WBsf996007 | |||||||||
| WBsf996008 | |||||||||
| WBsf996009 | |||||||||
| WBsf1017100 | |||||||||
| WBsf1017101 | |||||||||
| WBsf1017102 | |||||||||
| Transcription_factor | WBTranscriptionFactor001117 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043299 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030290 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058905 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038053 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012477 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021691 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020542 | ||||||||
| Expr1022515 | |||||||||
| Expr1037293 | |||||||||
| Expr1039985 | |||||||||
| Expr1147277 | |||||||||
| Expr1162345 | |||||||||
| Expr2013345 | |||||||||
| Expr2031577 | |||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | IV | Position | -2.90736 | Error | 0.094147 | |||
| Positive | Positive_clone | ZC416 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062117 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
