WormBase Tree Display for Gene: WBGene00022560

WBGene00022560 SMap: S_parent: Sequence: ZC204
  Identity: Version: 2
    Name: CGC_name: fbxb-16 Person_evidence: WBPerson655
      Sequence_name: ZC204.10
      Molecular_name: ZC204.10
        ZC204.10.1
        CE15102
      Other_name: CELE_ZC204.10 Accession_evidence: NDB BX284602
      Public_name: fbxb-16
    DB_info: Database: AceView gene 2B940
        WormQTL gene WBGene00022560
        WormFlux gene WBGene00022560
        NDB locus_tag CELE_ZC204.10
        Panther gene CAEEL|WormBase=WBGene00022560|UniProtKB=P91540
          family PTHR22899
        NCBI gene 191114
        RefSeq protein NM_061624.2
        TREEFAM TREEFAM_ID TF322477
        TrEMBL UniProtAcc P91540
        UniProt_GCRP UniProtAcc P91540
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (100)
    RNASeq_FPKM (74)
    Ortholog (25)
    Paralog (145)
    Structured_description: Concise_description: fbxb-16 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXB-16 also contains a C-terminal type 2 F-box-associated domain of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 18 Jun 2007 00:00:00
      Automated_description: Enriched in ABalpppapa; ABpraaaapa; GLR; body wall muscle cell; and excretory system based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZC204.10
    Corresponding_transcript: ZC204.10.1
    Associated_feature: WBsf649871
      WBsf986754
      WBsf222710
  Experimental_info: RNAi_result: WBRNAi00021604 Inferred_automatically: RNAi_primary
      WBRNAi00058779 Inferred_automatically: RNAi_primary
      WBRNAi00037978 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023527
      Expr1039967
      Expr1162201
      Expr2011617
      Expr2029856
    Drives_construct: WBCnstr00024156
    Construct_product: WBCnstr00024156
    Microarray_results (15)
    Expression_cluster (57)
    Interaction (67)
  Map_info: Map: II Position: -14.9627 Error: 0.025877
    Positive: Positive_clone: ZC204 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene