WormBase Tree Display for Gene: WBGene00022558
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| WBGene00022558 | SMap | S_parent | Sequence | ZC204 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-21 | Person_evidence | WBPerson655 | |||||
| Sequence_name | ZC204.8 | ||||||||
| Molecular_name | ZC204.8 | ||||||||
| ZC204.8.1 | |||||||||
| CE39534 | |||||||||
| Other_name | CELE_ZC204.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxb-21 | ||||||||
| DB_info | Database | AceView | gene | 2B936 | |||||
| WormQTL | gene | WBGene00022558 | |||||||
| WormFlux | gene | WBGene00022558 | |||||||
| NDB | locus_tag | CELE_ZC204.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022558|UniProtKB=P91538 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 191112 | |||||||
| RefSeq | protein | NM_061622.3 | |||||||
| TrEMBL | UniProtAcc | P91538 | |||||||
| UniProt_GCRP | UniProtAcc | P91538 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (39) | |||||||||
| Paralog (145) | |||||||||
| Structured_description | Concise_description | fbxb-21 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXB-21 also contains a C-terminal type 2 F-box-associated domain of presently unknown function. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 18 Jun 2007 00:00:00 | ||||||||
| Automated_description | Enriched in MSaapaapa and MSpapaapa based on single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and mex-3 based on tiling array; microarray; and RNA-seq studies. Is affected by ten chemicals including Alovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC204.8 | |||||||
| Corresponding_CDS_history | ZC204.8:wp152 | ||||||||
| Corresponding_transcript | ZC204.8.1 | ||||||||
| Associated_feature | WBsf986749 | ||||||||
| WBsf986750 | |||||||||
| WBsf986751 | |||||||||
| WBsf1011592 | |||||||||
| WBsf1011593 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058791 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021615 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018508 | ||||||||
| Expr1039965 | |||||||||
| Expr1162214 | |||||||||
| Expr2011623 | |||||||||
| Expr2029862 | |||||||||
| Drives_construct | WBCnstr00024158 | ||||||||
| Construct_product | WBCnstr00024158 | ||||||||
| Microarray_results | SMD_ZC204.8 | ||||||||
| A_12_P147270 | |||||||||
| A_12_P147271 | |||||||||
| GPL14144_ZC204.8_282-341_0.924_12_A | |||||||||
| GPL19516_CGZ0055638 | |||||||||
| GPL21109_ZC204.8 | |||||||||
| GPL8304_CE_WBGene00022558_A | |||||||||
| GPL8673_ZC204_8P00101 | |||||||||
| GPL8673_ZC204_8P00256 | |||||||||
| GPL8673_ZC204_8P00838 | |||||||||
| Expression_cluster (48) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | II | Position | -15.0687 | Error | 0.013307 | |||
| Positive | Positive_clone | ZC204 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
