WormBase Tree Display for Gene: WBGene00022505
expand all nodes | collapse all nodes | view schema
WBGene00022505 | SMap | S_parent | Sequence | ZC21 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | idpp | |||||
Allele (36) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (18) | ||||||
Structured_description | Concise_description | ZC21.3 encodes a protein predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | ||
WBPaper00012788 | ||||||
WBPaper00012830 | ||||||
WBPaper00012882 | ||||||
WBPaper00012897 | ||||||
WBPaper00013003 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Enriched in several structures, including ABplppppaa; ABprppppaa; AUA; accessory cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; tiling array; and microarray studies. Is affected by nineteen chemicals including Ethanol; 1-methylnicotinamide; and nicotinic acid based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | ZC21.3a | ||||
ZC21.3b | ||||||
ZC21.3c | ||||||
ZC21.3d | ||||||
ZC21.3e | ||||||
Corresponding_CDS_history | ZC21.3:wp101 | |||||
ZC21.3:wp186 | ||||||
ZC21.3a:wp275 | ||||||
ZC21.3b:wp275 | ||||||
Corresponding_transcript | ZC21.3a.1 | |||||
ZC21.3b.1 | ||||||
ZC21.3c.1 | ||||||
ZC21.3d.1 | ||||||
ZC21.3e.1 | ||||||
Other_sequence (11) | ||||||
Associated_feature | WBsf645420 | |||||
WBsf993388 | ||||||
WBsf1015448 | ||||||
Experimental_info | RNAi_result | WBRNAi00058795 | Inferred_automatically | RNAi_primary | ||
WBRNAi00021619 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00005225 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00037987 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr67 | |||||
Expr1026616 | ||||||
Expr1028105 | ||||||
Expr1039948 | ||||||
Expr1040236 | ||||||
Expr1162218 | ||||||
Expr1162221 | ||||||
Expr2008576 | ||||||
Expr2026815 | ||||||
Drives_construct | WBCnstr00023615 | |||||
WBCnstr00024195 | ||||||
Construct_product | WBCnstr00023615 | |||||
WBCnstr00024195 | ||||||
Microarray_results (38) | ||||||
Expression_cluster (215) | ||||||
Map_info | Map | III | Position | -0.2542 | ||
Positive | Positive_clone | ZC21 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00064648 | |||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |