WormBase Tree Display for CDS: ZC21.3c
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ZC21.3c | Evidence | Curator_confirmed | WBPerson1983 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZC21 | |||
Structure | Source_exons | 1 | 17 | |||
267 | 346 | |||||
422 | 1053 | |||||
DB_info | Database | TrEMBL | UniProtAcc | U4PBK5 | ||
UniProt | UniProtAcc | U4PBK5 | ||||
AlphaFold | entry | U4PBK5 | ||||
NCBI_protein | GI_number | GI:548931395 | ||||
Protein_id | CHROMOSOME_III | CDH93249 | 1 | |||
DB_remark | IDPP-15 protein | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson1983 | ||||
From_analysis | RNASeq_Hillier_elegans | |||||
Visible | Gene | WBGene00022505 | ||||
Corresponding_transcript | ZC21.3c.1 | |||||
Corresponding_protein | CE48856 | |||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA | L3_Nanopore_Roach_45746 | Inferred_automatically | transcript_builder.pl | |||
EM_Nanopore_Li_77286 | Inferred_automatically | transcript_builder.pl | ||||
YA_Nanopore_Li_65628 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results (14) | ||||||
Brief_identification | Prion-like-(Q/N-rich)-domain-bearing protein | Accession_evidence | UniProt | TR:U4PME0 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 26 Sep 2013 00:00:00 | WBPerson1983 | ||||
Remark | [130729 pad] Autoconversion from AG1201_ZC21.3.T5. This Isoform seems to contain a retained Intron/novel splicing that causes premature termination in a large finat ORF. | Curator_confirmed | WBPerson1983 | |||
From_analysis | RNASeq_Hillier_elegans | |||||
Method | curated |