WormBase Tree Display for Gene: WBGene00022399
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| WBGene00022399 | SMap | S_parent | Sequence | Y97E10AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y97E10AR.4 | |||||||
| Molecular_name | Y97E10AR.4 | ||||||||
| Y97E10AR.4.1 | |||||||||
| CE52424 | |||||||||
| Y97E10AR.4.2 | |||||||||
| Other_name | Y97E10AR.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y97E10AR.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y97E10AR.4 | ||||||||
| DB_info | Database | AceView | gene | 5I488 | |||||
| WormQTL | gene | WBGene00022399 | |||||||
| WormFlux | gene | WBGene00022399 | |||||||
| NDB | locus_tag | CELE_Y97E10AR.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022399|UniProtKB=Q9N2U7 | |||||||
| family | PTHR23362 | ||||||||
| NCBI | gene | 179176 | |||||||
| RefSeq | protein | NM_072659.8 | |||||||
| TrEMBL | UniProtAcc | Q9N2U7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N2U7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5554 | ||||||||
| CEOP547 | |||||||||
| Ortholog (24) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Enriched in ABplpppppp; ABprpppppp; M cell; enteric muscle; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by nine chemicals including Zidovudine; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y97E10AR.4 | |||||||
| Corresponding_CDS_history | Y97E10AR.4:wp262 | ||||||||
| Corresponding_transcript | Y97E10AR.4.1 | ||||||||
| Y97E10AR.4.2 | |||||||||
| Associated_feature | WBsf669135 | ||||||||
| WBsf669136 | |||||||||
| WBsf1000562 | |||||||||
| WBsf234014 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061952 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076854 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058681 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021539 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001015 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037931 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram457 | ||||||||
| Expr1024166 | |||||||||
| Expr1039891 | |||||||||
| Expr1162101 | |||||||||
| Expr2008527 | |||||||||
| Expr2026765 | |||||||||
| Drives_construct | WBCnstr00024254 | ||||||||
| Construct_product | WBCnstr00024254 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (109) | |||||||||
| Map_info | Positive | Positive_clone | Y97E10AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.00088 | |||||||
| Method | Gene |
