WormBase Tree Display for Gene: WBGene00022399

WBGene00022399 SMap: S_parent: Sequence: Y97E10AR
  Identity: Version: 1
    Name: Sequence_name: Y97E10AR.4
      Molecular_name: Y97E10AR.4
        Y97E10AR.4.1
        CE52424
        Y97E10AR.4.2
      Other_name: Y97E10AR.c Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y97E10AR.4 Accession_evidence: NDB BX284605
      Public_name: Y97E10AR.4
    DB_info: Database: AceView gene 5I488
        WormQTL gene WBGene00022399
        WormFlux gene WBGene00022399
        NDB locus_tag CELE_Y97E10AR.4
        Panther gene CAEEL|WormBase=WBGene00022399|UniProtKB=Q9N2U7
          family PTHR23362
        NCBI gene 179176
        RefSeq protein NM_072659.8
        TrEMBL UniProtAcc Q9N2U7
        UniProt_GCRP UniProtAcc Q9N2U7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (34)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5554
      CEOP547
    Ortholog: WBGene00052961 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154197 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00088280 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00219184 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CSP26.g8643 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g16241 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g4338 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g4342 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4616 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g9374 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g9375 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g9376 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g9379 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g6818 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g14553 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9787 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9788 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7590 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-Y97E10AR.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold481.g1844 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00649.g14004 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03676 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018727 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrV_pilon.g14876 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (35)
    Structured_description: Automated_description: Enriched in ABplpppppp; ABprpppppp; M cell; enteric muscle; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by nine chemicals including Zidovudine; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y97E10AR.4
    Corresponding_CDS_history: Y97E10AR.4:wp262
    Corresponding_transcript: Y97E10AR.4.1
      Y97E10AR.4.2
    Associated_feature: WBsf669135
      WBsf669136
      WBsf1000562
      WBsf234014
  Experimental_info: RNAi_result: WBRNAi00061952 Inferred_automatically: RNAi_primary
      WBRNAi00076854 Inferred_automatically: RNAi_primary
      WBRNAi00058681 Inferred_automatically: RNAi_primary
      WBRNAi00021539 Inferred_automatically: RNAi_primary
      WBRNAi00001015 Inferred_automatically: RNAi_primary
      WBRNAi00037931 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram457
      Expr1024166
      Expr1039891
      Expr1162101
      Expr2008527
      Expr2026765
    Drives_construct: WBCnstr00024254
    Construct_product: WBCnstr00024254
    Microarray_results (19)
    Expression_cluster (109)
  Map_info: Positive: Positive_clone: Y97E10AR Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 1.00088
  Method: Gene