WormBase Tree Display for Gene: WBGene00022378
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| WBGene00022378 | SMap | S_parent | Sequence | Y94H6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y94H6A.5 | |||||||
| Molecular_name | Y94H6A.5a | ||||||||
| Y94H6A.5a.1 | |||||||||
| CE37302 | |||||||||
| Y94H6A.5b | |||||||||
| CE48969 | |||||||||
| Y94H6A.5b.1 | |||||||||
| Other_name | Y94H6A.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y94H6A.5 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y94H6A.5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (436) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP4671 | ||||||||
| Ortholog (41) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Concise_description | Y94H6A.5 encodes a DEAD-box helicase; loss of Y94H6A.5 activity via RNAi indicates that Y94H6A.5 activity is required for positive regulation of growth rate and larval development. | Paper_evidence | WBPaper00025054 | |||||
| WBPaper00031057 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 09 Oct 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in rRNA processing. Predicted to be located in nucleolus. Is an ortholog of human DDX54 (DEAD-box helicase 54). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y94H6A.5a | |||||||
| Y94H6A.5b | |||||||||
| Corresponding_CDS_history | Y94H6A.5a:wp129 | ||||||||
| Y94H6A.5b:wp129 | |||||||||
| Y94H6A.5b:wp239 | |||||||||
| Corresponding_transcript | Y94H6A.5a.1 | ||||||||
| Y94H6A.5b.1 | |||||||||
| Other_sequence (55) | |||||||||
| Associated_feature | WBsf651678 | ||||||||
| WBsf667781 | |||||||||
| WBsf667782 | |||||||||
| WBsf229825 | |||||||||
| WBsf229826 | |||||||||
| WBsf229827 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058656 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037918 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075470 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018078 | ||||||||
| Expr1039878 | |||||||||
| Expr1162078 | |||||||||
| Expr2008513 | |||||||||
| Expr2026751 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (172) | |||||||||
| Map_info | Positive | Positive_clone | Y94H6A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.7555 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
