WormBase Tree Display for Gene: WBGene00022188
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| WBGene00022188 | SMap | S_parent | Sequence | Y71H2AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | txdc-17 | Person_evidence | WBPerson3046 | |||||
| Sequence_name | Y71H2AR.1 | ||||||||
| Molecular_name | Y71H2AR.1 | ||||||||
| Y71H2AR.1.1 | |||||||||
| CE27323 | |||||||||
| Other_name | CELE_Y71H2AR.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | txdc-17 | ||||||||
| DB_info | Database | AceView | gene | 3D925 | |||||
| WormQTL | gene | WBGene00022188 | |||||||
| WormFlux | gene | WBGene00022188 | |||||||
| NDB | locus_tag | CELE_Y71H2AR.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022188|UniProtKB=Q9BL27 | |||||||
| family | PTHR12452 | ||||||||
| NCBI | gene | 175400 | |||||||
| RefSeq | protein | NM_065225.6 | |||||||
| TREEFAM | TREEFAM_ID | TF313854 | |||||||
| TrEMBL | UniProtAcc | Q9BL27 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BL27 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Aug 2020 17:02:48 | WBPerson1983 | Name_change | CGC_name | txdc-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | txdc | ||||||||
| Allele (50) | |||||||||
| Strain | WBStrain00049465 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00091801 | ||||||||
| 00091802 | |||||||||
| 00126358 | |||||||||
| Contained_in_operon | CEOP3086 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein-disulfide reductase (NAD(P)) activity. Predicted to be located in cytosol. Is an ortholog of human TXNDC17 (thioredoxin domain containing 17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71H2AR.1 | |||||||
| Corresponding_transcript | Y71H2AR.1.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf224558 | ||||||||
| WBsf224559 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058254 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016301 | ||||||||
| Expr1039782 | |||||||||
| Expr1161673 | |||||||||
| Expr2008330 | |||||||||
| Expr2026570 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction | WBInteraction000114277 | ||||||||
| WBInteraction000550166 | |||||||||
| WBInteraction000578332 | |||||||||
| Map_info | Map | III | Position | -9.75331 | |||||
| Positive | Positive_clone | Y71H2AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
