WormBase Tree Display for Gene: WBGene00022188
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WBGene00022188 | SMap | S_parent | Sequence | Y71H2AR | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | txdc-17 | Person_evidence | WBPerson3046 | |||||
Sequence_name | Y71H2AR.1 | ||||||||
Molecular_name | Y71H2AR.1 | ||||||||
Y71H2AR.1.1 | |||||||||
CE27323 | |||||||||
Other_name | CELE_Y71H2AR.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | txdc-17 | ||||||||
DB_info | Database | AceView | gene | 3D925 | |||||
WormQTL | gene | WBGene00022188 | |||||||
WormFlux | gene | WBGene00022188 | |||||||
NDB | locus_tag | CELE_Y71H2AR.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022188|UniProtKB=Q9BL27 | |||||||
family | PTHR12452 | ||||||||
NCBI | gene | 175400 | |||||||
RefSeq | protein | NM_065225.6 | |||||||
TREEFAM | TREEFAM_ID | TF313854 | |||||||
TrEMBL | UniProtAcc | Q9BL27 | |||||||
UniProt_GCRP | UniProtAcc | Q9BL27 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Aug 2020 17:02:48 | WBPerson1983 | Name_change | CGC_name | txdc-17 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | txdc | ||||||||
Allele | WBVar00032241 | ||||||||
WBVar01994748 | |||||||||
WBVar02154283 | |||||||||
WBVar00032246 | |||||||||
WBVar01938303 | |||||||||
WBVar01938304 | |||||||||
WBVar01500082 | |||||||||
WBVar01408077 | |||||||||
WBVar01408079 | |||||||||
WBVar01408080 | |||||||||
WBVar01408081 | |||||||||
WBVar01913085 | |||||||||
WBVar00233422 | |||||||||
WBVar01701684 | |||||||||
WBVar02086595 | |||||||||
WBVar01260567 | |||||||||
WBVar01498832 | |||||||||
WBVar01260568 | |||||||||
WBVar01260569 | |||||||||
WBVar01260570 | |||||||||
WBVar01260571 | |||||||||
WBVar02085324 | |||||||||
WBVar01396349 | |||||||||
WBVar01396350 | |||||||||
WBVar01396351 | |||||||||
WBVar01474171 | |||||||||
WBVar01499966 | |||||||||
WBVar01541157 | |||||||||
WBVar01541158 | |||||||||
WBVar01541159 | |||||||||
WBVar01541160 | |||||||||
WBVar01655993 | |||||||||
WBVar00812116 | |||||||||
WBVar00812117 | |||||||||
WBVar00812118 | |||||||||
WBVar00812119 | |||||||||
WBVar00812120 | |||||||||
WBVar00812121 | |||||||||
WBVar01401493 | |||||||||
WBVar01606964 | |||||||||
WBVar01565892 | |||||||||
WBVar01944609 | |||||||||
WBVar01944610 | |||||||||
WBVar01802343 | |||||||||
WBVar01802344 | |||||||||
WBVar01473803 | |||||||||
WBVar00032226 | |||||||||
WBVar02074144 | |||||||||
WBVar02074145 | |||||||||
WBVar00032231 | |||||||||
Strain | WBStrain00049465 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00091801 | ||||||||
00091802 | |||||||||
00126358 | |||||||||
Contained_in_operon | CEOP3086 | ||||||||
Ortholog (35) | |||||||||
Structured_description | Automated_description | Predicted to enable protein-disulfide reductase (NAD(P)) activity. Predicted to be located in cytosol. Is an ortholog of human TXNDC17 (thioredoxin domain containing 17). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y71H2AR.1 | |||||||
Corresponding_transcript | Y71H2AR.1.1 | ||||||||
Other_sequence (12) | |||||||||
Associated_feature | WBsf224558 | ||||||||
WBsf224559 | |||||||||
Experimental_info | RNAi_result | WBRNAi00058254 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1016301 | ||||||||
Expr1039782 | |||||||||
Expr1161673 | |||||||||
Expr2008330 | |||||||||
Expr2026570 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (111) | |||||||||
Interaction | WBInteraction000114277 | ||||||||
WBInteraction000550166 | |||||||||
WBInteraction000578332 | |||||||||
Map_info | Map | III | Position | -9.75331 | |||||
Positive | Positive_clone | Y71H2AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |