WormBase Tree Display for Gene: WBGene00022056
expand all nodes | collapse all nodes | view schema
| WBGene00022056 | SMap | S_parent | Sequence | Y67D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ddx-35 | |||||||
| Sequence_name | Y67D2.6 | ||||||||
| Molecular_name | Y67D2.6 | ||||||||
| Y67D2.6.1 | |||||||||
| CE27311 | |||||||||
| Other_name | CELE_Y67D2.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ddx-35 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2015 15:39:47 | WBPerson2970 | Name_change | CGC_name | ddx-35 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ddx | ||||||||
| Allele (385) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP3860 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00003389 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003392 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003393 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004355 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009922 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015525 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018967 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020263 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021365 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022433 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity and helicase activity. Predicted to be part of catalytic step 2 spliceosome. Is an ortholog of human DHX35 (DEAH-box helicase 35). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y67D2.6 | |||||||
| Corresponding_transcript | Y67D2.6.1 | ||||||||
| Other_sequence (63) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000730 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075512 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057983 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075519 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014790 | ||||||||
| Expr1039702 | |||||||||
| Expr1161410 | |||||||||
| Expr2010838 | |||||||||
| Expr2029076 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | III | Position | -21.4439 | |||||
| Positive | Positive_clone | Y67D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
