WormBase Tree Display for Gene: WBGene00009922
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| WBGene00009922 | SMap | S_parent | Sequence | F52B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F52B5.3 | |||||||
| Molecular_name | F52B5.3 | ||||||||
| F52B5.3.1 | |||||||||
| CE05718 | |||||||||
| Other_name | CELE_F52B5.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F52B5.3 | ||||||||
| DB_info | Database | AceView | gene | 1I896 | |||||
| WormQTL | gene | WBGene00009922 | |||||||
| WormFlux | gene | WBGene00009922 | |||||||
| NDB | locus_tag | CELE_F52B5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009922|UniProtKB=Q20644 | |||||||
| family | PTHR18934 | ||||||||
| NCBI | gene | 172615 | |||||||
| RefSeq | protein | NM_059859.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318311 | |||||||
| TrEMBL | UniProtAcc | Q20644 | |||||||
| UniProt_GCRP | UniProtAcc | Q20644 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (71) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00068648 | ||||||||
| 00068649 | |||||||||
| 00068650 | |||||||||
| 00068651 | |||||||||
| 00068652 | |||||||||
| 00068653 | |||||||||
| 00117485 | |||||||||
| 00117486 | |||||||||
| Contained_in_operon | CEOP1460 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00003389 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003392 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003393 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004355 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018967 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022433 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022056 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020263 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015525 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021365 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The F52B5.3 gene encodes a DEAH helicase orthologous to the Drosophila SpindleE protein. | Paper_evidence | WBPaper00004587 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity and helicase activity. Is an ortholog of human YTHDC2 (YTH N6-methyladenosine RNA binding protein C2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52B5.3 | |||||||
| Corresponding_transcript | F52B5.3.1 | ||||||||
| Other_sequence | JI164321.1 | ||||||||
| JI465896.1 | |||||||||
| Associated_feature | WBsf649382 | ||||||||
| WBsf664551 | |||||||||
| WBsf219902 | |||||||||
| WBsf219903 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00116960 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007901 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075513 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003736 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047922 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015013 | ||||||||
| Expr1034322 | |||||||||
| Expr1151751 | |||||||||
| Expr2003973 | |||||||||
| Expr2022194 | |||||||||
| Drives_construct | WBCnstr00031813 | ||||||||
| Construct_product | WBCnstr00031813 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Positive | Positive_clone | F52B5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 2.73041 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
