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WormBase Tree Display for Gene: WBGene00022018

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Name Class

WBGene00022018SMapS_parentSequenceY61A9LA
IdentityVersion1
NameSequence_nameY61A9LA.7
Molecular_nameY61A9LA.7a
Y61A9LA.7a.1
CE50378
Y61A9LA.7b
CE50435
Y61A9LA.7b.1
Other_nameY61A9LA.fCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y61A9LA.7Accession_evidenceNDBBX284605
Public_nameY61A9LA.7
DB_infoDatabaseAceViewgene5F38
WormQTLgeneWBGene00022018
WormFluxgeneWBGene00022018
NDBlocus_tagCELE_Y61A9LA.7
NCBIgene190446
RefSeqproteinNM_001313353.4
NM_001313354.4
TrEMBLUniProtAccA0A0K3AW52
A0A0K3ASI8
UniProt_GCRPUniProtAccA0A0K3ASI8
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:05WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (30)
RNASeq_FPKM (74)
Ortholog (21)
Structured_descriptionAutomated_descriptionEnriched in several structures, including RIM; anterior arcade cell; coelomocyte; head mesodermal cell; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including mianserin; Alovudine; and Psoralens based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY61A9LA.7a
Y61A9LA.7b
Corresponding_CDS_historyY61A9LA.7:wp246
Corresponding_transcriptY61A9LA.7a.1
Y61A9LA.7b.1
Associated_featureWBsf652580
WBsf652581
WBsf668907
WBsf233590
Experimental_infoRNAi_resultWBRNAi00057830Inferred_automaticallyRNAi_primary
WBRNAi00021205Inferred_automaticallyRNAi_primary
WBRNAi00037661Inferred_automaticallyRNAi_primary
Expr_patternExpr1012615
Expr1161267
Expr2008130
Expr2026369
Microarray_results (23)
Expression_clusterWBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00044736:oscillating_dev_expression
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045774:clk-1_downregulated
WBPaper00045861:wdr-5(ok1417)_downregulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053302:alovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:spt-16(RNAi)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_adult
WBPaper00056169:rrf-3(pk1426)_downregulated_L3
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_L2
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057140:pptr-1(tm3103)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059231:alh-6(lax105)_L4_upregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061274:hypergravity_10xg_upregulated
WBPaper00061340:Anterior_arcade_cell
WBPaper00061340:Coelomocyte
WBPaper00061340:g1A_g1P
WBPaper00061340:g1A_parent
WBPaper00061340:mc1
WBPaper00061340:mc2
WBPaper00061340:mc3
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061340:Pharyngeal_marginal_cell
WBPaper00061340:pm3_pm4_pm5
WBPaper00061340:pm6
WBPaper00061340:pm7
WBPaper00061340:pm8
WBPaper00061340:RIM
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:col-128-cdh-10_9234
WBPaper00061651:Coelomocyte_enriched
WBPaper00062118:neural-HSF-1_downregulated
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062534:fat-P-80_downregulated
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065841:12_0
WBPaper00065841:23_0
WBPaper00065841:110_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00032948:FedUp
WBPaper00034739:N2lessDR1350
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_G
WBPaper00038172:crh-1null_down_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00046083:oga-1(ok1207)_OP50_downregulated
WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00055899:nitroguanidine_regulated
[cgc6390]:Cluster_B
Map_infoPositivePositive_cloneY61A9LAInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-5.01746
MethodGene