WormBase Tree Display for Gene: WBGene00022007
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WBGene00022007 | SMap | S_parent | Sequence | Y59H11AM | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mpst-6 | Person_evidence | WBPerson1852 | |||||
Sequence_name | Y59H11AM.3 | ||||||||
Molecular_name | Y59H11AM.3 | ||||||||
Y59H11AM.3.1 | |||||||||
CE25519 | |||||||||
Other_name | Y59H11AM.b | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y59H11AM.3 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | mpst-6 | ||||||||
DB_info | Database | AceView | gene | 4J328 | |||||
WormFlux | gene | WBGene00022007 | |||||||
NDB | locus_tag | CELE_Y59H11AM.3 | |||||||
NCBI | gene | 177661 | |||||||
RefSeq | protein | NM_069060.3 | |||||||
TREEFAM | TREEFAM_ID | TF315133 | |||||||
TrEMBL | UniProtAcc | G5ECA0 | |||||||
UniProt_GCRP | UniProtAcc | G5ECA0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Mar 2011 11:09:17 | WBPerson2970 | Name_change | CGC_name | mpst-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mpst | ||||||||
Allele | WBVar01500079 | ||||||||
WBVar02122464 | |||||||||
WBVar01498996 | |||||||||
WBVar02121213 | |||||||||
WBVar01499396 | |||||||||
WBVar02123086 | |||||||||
WBVar01499633 | |||||||||
WBVar01498928 | |||||||||
WBVar02122609 | |||||||||
WBVar01500245 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00126185 | ||||||||
Ortholog (42) | |||||||||
Paralog | WBGene00008409 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00010380 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00011307 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00017387 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00022006 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00010383 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable sulfurtransferase activity. Is an ortholog of human MPST (mercaptopyruvate sulfurtransferase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y59H11AM.3 | |||||||
Corresponding_transcript | Y59H11AM.3.1 | ||||||||
Other_sequence | FD517645.1 | ||||||||
CSC00860_2 | |||||||||
CR11297 | |||||||||
FD517140.1 | |||||||||
CR08836 | |||||||||
Associated_feature | WBsf997242 | ||||||||
WBsf230442 | |||||||||
Experimental_info | RNAi_result | WBRNAi00022563 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057781 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037640 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057782 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1161213 | ||||||||
Drives_construct | WBCnstr00024367 | ||||||||
Construct_product | WBCnstr00024367 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (77) | |||||||||
Interaction (9) | |||||||||
Map_info | Map | IV | Position | 3.90388 | |||||
Positive | Positive_clone | Y59H11AM | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00040475 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |