WormBase Tree Display for Gene: WBGene00021948
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| WBGene00021948 | SMap | S_parent | Sequence | Y55F3C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | kvs-5 | Person_evidence | WBPerson260 | |||||
| WBPerson145 | |||||||||
| Sequence_name | Y55F3C.3 | ||||||||
| Molecular_name (18) | |||||||||
| Other_name | Y55F3C.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y55F3C.e | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y55F3C.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | kvs-5 | ||||||||
| DB_info | Database | AceView | gene | 4B505 | |||||
| WormQTL | gene | WBGene00021948 | |||||||
| WormFlux | gene | WBGene00021948 | |||||||
| NDB | locus_tag | CELE_Y55F3C.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021948|UniProtKB=U4PLR3 | |||||||
| family | PTHR11537 | ||||||||
| NCBI | gene | 176899 | |||||||
| RefSeq | protein | NM_067577.8 | |||||||
| NM_001307395.4 | |||||||||
| NM_001307396.4 | |||||||||
| NM_001307394.3 | |||||||||
| NM_001307393.3 | |||||||||
| NM_001307392.3 | |||||||||
| TrEMBL | UniProtAcc | U4PE60 | |||||||
| U4PR20 | |||||||||
| U4PBB7 | |||||||||
| U4PAX5 | |||||||||
| Q95XV8 | |||||||||
| U4PLR3 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PLR3 | |||||||
| OMIM | gene | 600397 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Jul 2011 16:30:08 | WBPerson2970 | Name_change | CGC_name | kvs-5 | ||||
| 3 | 04 Sep 2013 14:28:38 | WBPerson4025 | Event | Acquires_merge | WBGene00043706 | ||||
| Acquires_merge | WBGene00043706 | ||||||||
| Status | Live | ||||||||
| Gene_info (9) | |||||||||
| Disease_info | Potential_model | DOID:0080461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6231) | ||||
| DOID:1826 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6231) | ||||||
| Molecular_info | Corresponding_CDS | Y55F3C.3a | |||||||
| Y55F3C.3c | |||||||||
| Y55F3C.3d | |||||||||
| Y55F3C.3e | |||||||||
| Y55F3C.3f | |||||||||
| Y55F3C.3g | |||||||||
| Corresponding_CDS_history | Y55F3C.3:wp175 | ||||||||
| Y55F3C.3b:wp274 | |||||||||
| Corresponding_transcript | Y55F3C.3a.1 | ||||||||
| Y55F3C.3c.1 | |||||||||
| Y55F3C.3d.1 | |||||||||
| Y55F3C.3e.1 | |||||||||
| Y55F3C.3f.1 | |||||||||
| Y55F3C.3g.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (27) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021056 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002374 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057555 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021057 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9462 | ||||||||
| Expr1016026 | |||||||||
| Expr1017500 | |||||||||
| Expr1039655 | |||||||||
| Expr1160988 | |||||||||
| Expr1160989 | |||||||||
| Expr2012988 | |||||||||
| Expr2031220 | |||||||||
| Drives_construct | WBCnstr00024396 | ||||||||
| Construct_product | WBCnstr00014027 | ||||||||
| WBCnstr00024396 | |||||||||
| Microarray_results (44) | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction | WBInteraction000112836 | ||||||||
| WBInteraction000112839 | |||||||||
| WBInteraction000112840 | |||||||||
| WBInteraction000162561 | |||||||||
| WBInteraction000167519 | |||||||||
| WBInteraction000170122 | |||||||||
| WBInteraction000293558 | |||||||||
| WBInteraction000469834 | |||||||||
| WBInteraction000472696 | |||||||||
| Map_info | Map | IV | Position | -23.571 | Error | 0.008513 | |||
| Positive | Positive_clone | Y55F3C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064898 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
