WormBase Tree Display for Gene: WBGene00021900

WBGene00021900 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: Sequence_name: Y54H5A.2
      Molecular_name: Y54H5A.2
        Y54H5A.2.1
        CE32024
      Other_name: CELE_Y54H5A.2 Accession_evidence: NDB BX284603
      Public_name: Y54H5A.2
    DB_info: Database: AceView gene 3G228
        WormQTL gene WBGene00021900
        WormFlux gene WBGene00021900
        NDB locus_tag CELE_Y54H5A.2
        Panther gene CAEEL|WormBase=WBGene00021900|UniProtKB=Q9BL64
          family PTHR13387
        NCBI gene 175699
        RefSeq protein NM_065688.7
        TREEFAM TREEFAM_ID TF313296
        TrEMBL UniProtAcc Q9BL64
        UniProt_GCRP UniProtAcc Q9BL64
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (151)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP3259
    Ortholog (35)
    Structured_description: Automated_description: Enriched in several structures, including ABarppaapp; GLR; germ line; lateral ganglion; and pharyngeal cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; gld-1; and sir-2.1 based on microarray; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including bisphenol S; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein HGH1 N-terminal; Armadillo-type fold; Protein Hgh1; Domain of unknown function (DUF384); Armadillo-like helical; Protein HGH1 C-terminal; Domain of unknown function (DUF383); and Phosphorylation site. Is an ortholog of human HGH1 (HGH1 homolog). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y54H5A.2
    Corresponding_CDS_history: Y54H5A.2:wp86
    Corresponding_transcript: Y54H5A.2.1
    Other_sequence (24)
    Associated_feature (36)
  Experimental_info: RNAi_result: WBRNAi00037504 Inferred_automatically: RNAi_primary
      WBRNAi00008676 Inferred_automatically: RNAi_primary
      WBRNAi00057489 Inferred_automatically: RNAi_primary
      WBRNAi00007073 Inferred_automatically: RNAi_primary
      WBRNAi00057488 Inferred_automatically: RNAi_primary
      WBRNAi00095803 Inferred_automatically: RNAi_primary
      WBRNAi00070199 Inferred_automatically: RNAi_primary
      WBRNAi00057486 Inferred_automatically: RNAi_primary
      WBRNAi00085872 Inferred_automatically: RNAi_primary
      WBRNAi00057487 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025778
      Expr1039617
      Expr1160928
      Expr2007964
      Expr2026206
    Drives_construct: WBCnstr00024409
    Construct_product: WBCnstr00024409
    Microarray_results (21)
    Expression_cluster (124)
    Interaction: WBInteraction000041552
      WBInteraction000042301
      WBInteraction000045188
      WBInteraction000325345
      WBInteraction000548744
      WBInteraction000574986
      WBInteraction000579679
      WBInteraction000583540
      WBInteraction000585021
      WBInteraction000586789
    WBProcess: WBbiopr:00000065
  Map_info: Positive: Positive_clone: Y54H5A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.0716
  Reference: WBPaper00033040
    WBPaper00038491
    WBPaper00055090
  Method: Gene