WormBase Tree Display for Gene: WBGene00021886
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| WBGene00021886 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54G2A.21 | |||||||
| Molecular_name | Y54G2A.21 | ||||||||
| Other_name | CELE_Y54G2A.21 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y54G2A.21 | ||||||||
| DB_info | Database | AceView | gene | 4D662 | |||||
| 4D664 | |||||||||
| WormQTL | gene | WBGene00021886 | |||||||
| WormFlux | gene | WBGene00021886 | |||||||
| NDB | locus_tag | CELE_Y54G2A.21 | |||||||
| NCBI | gene | 190282 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Allele (98) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00157740 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||
| WBGene00154700 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00153849 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| Paralog | WBGene00007075 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00017796 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021671 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WBGene00043988 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in AVK; germ line; sensory neurons; and somatic gonad precursor based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Alovudine; metformin; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | Y54G2A.21:wp124 | |||||||
| Y54G2A.21:wp167 | |||||||||
| Y54G2A.21:wp183 | |||||||||
| Y54G2A.21:wp187 | |||||||||
| Y54G2A.21:wp203 | |||||||||
| Y54G2A.21:wp208 | |||||||||
| Y54G2A.21:wp242 | |||||||||
| Corresponding_pseudogene | Y54G2A.21 | ||||||||
| Associated_feature | WBsf667792 | ||||||||
| WBsf667793 | |||||||||
| WBsf995813 | |||||||||
| WBsf995814 | |||||||||
| WBsf995815 | |||||||||
| Experimental_info | Expr_pattern | Expr1160885 | |||||||
| Microarray_results | A_12_P101837 | ||||||||
| A_12_P154897 | |||||||||
| GPL13394_WBGene00021886 | |||||||||
| GPL13914_Y54G2A.21 | |||||||||
| GPL19516_CGZ0043057 | |||||||||
| GPL19516_CGZ0043058 | |||||||||
| GPL19516_CGZ0049175 | |||||||||
| GPL19516_CGZ0049176 | |||||||||
| GPL21109_Y116F11B.10a | |||||||||
| GPL21109_Y54G2A.21.1 | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction | WBInteraction000373466 | ||||||||
| WBInteraction000373468 | |||||||||
| WBInteraction000438244 | |||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.71775 | |||||||
| Method | Gene |
