WormBase Tree Display for Gene: WBGene00021877
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| WBGene00021877 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y54G2A.12 | |||||||
| Molecular_name | Y54G2A.12 | ||||||||
| Y54G2A.12.1 | |||||||||
| CE41063 | |||||||||
| Other_name | Y54G2A.z | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54G2A.12 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y54G2A.12 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Apr 2007 11:09:02 | WBPerson2970 | Event | Acquires_merge | WBGene00044494 | ||||
| Acquires_merge | WBGene00044494 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (116) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00126078 | ||||||||
| 00126079 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00018625 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of catalytic step 2 spliceosome. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 15. Is an ortholog of human CDC40 (cell division cycle 40). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112326 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17350) | ||||
| Molecular_info | Corresponding_CDS | Y54G2A.12 | |||||||
| Corresponding_CDS_history | Y54G2A.12:wp175 | ||||||||
| Corresponding_transcript | Y54G2A.12.1 | ||||||||
| Other_sequence | JI471005.1 | ||||||||
| CR11891 | |||||||||
| Associated_feature | WBsf995774 | ||||||||
| WBsf995775 | |||||||||
| WBsf995776 | |||||||||
| WBsf1016948 | |||||||||
| WBsf1016949 | |||||||||
| WBsf1016950 | |||||||||
| WBsf229836 | |||||||||
| Experimental_info | Expr_pattern | Expr1025844 | |||||||
| Expr1039608 | |||||||||
| Expr1160875 | |||||||||
| Expr2007933 | |||||||||
| Expr2026175 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction | WBInteraction000566840 | ||||||||
| WBInteraction000570219 | |||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.7404 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
