WormBase Tree Display for Gene: WBGene00021850
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| WBGene00021850 | SMap | S_parent | Sequence | Y54F10AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54F10AM.6 | |||||||
| Molecular_name | Y54F10AM.6 | ||||||||
| Y54F10AM.6.1 | |||||||||
| CE26176 | |||||||||
| Y54F10AM.6.2 | |||||||||
| Other_name | CELE_Y54F10AM.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y54F10AM.6 | ||||||||
| DB_info | Database | AceView | gene | 3D599 | |||||
| WormQTL | gene | WBGene00021850 | |||||||
| WormFlux | gene | WBGene00021850 | |||||||
| NDB | locus_tag | CELE_Y54F10AM.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021850|UniProtKB=Q9BL06 | |||||||
| family | PTHR37443 | ||||||||
| NCBI | gene | 175370 | |||||||
| RefSeq | protein | NM_065170.4 | |||||||
| TREEFAM | TREEFAM_ID | TF320248 | |||||||
| TrEMBL | UniProtAcc | Q9BL06 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BL06 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (73) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00010972 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020560 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpppapa; ABplpapapa; excretory cell; interfacial epithelial cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray; RNA-seq; and proteomic studies. Is affected by eighteen chemicals including Heme; methylmercury hydroxide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Uncharacterized protein T19C3.2-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54F10AM.6 | |||||||
| Corresponding_transcript | Y54F10AM.6.1 | ||||||||
| Y54F10AM.6.2 | |||||||||
| Other_sequence | FG978544.1 | ||||||||
| HBC09245_1 | |||||||||
| Oden_isotig24188 | |||||||||
| JI179551.1 | |||||||||
| PPC04497_1 | |||||||||
| BMC09182_1 | |||||||||
| HBC09809_1 | |||||||||
| JI172181.1 | |||||||||
| Dviv_isotig26056 | |||||||||
| Associated_feature | WBsf644983 | ||||||||
| WBsf658680 | |||||||||
| WBsf991533 | |||||||||
| WBsf1014414 | |||||||||
| WBsf224520 | |||||||||
| WBsf224521 | |||||||||
| WBsf224522 | |||||||||
| WBsf224523 | |||||||||
| WBsf224524 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057404 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000243 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026646 | ||||||||
| Expr1039593 | |||||||||
| Expr1160834 | |||||||||
| Expr2007910 | |||||||||
| Expr2026152 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (200) | |||||||||
| Interaction | WBInteraction000561069 | ||||||||
| Map_info | Positive | Positive_clone | Y54F10AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -12.9807 | |||||||
| Method | Gene |
