WormBase Tree Display for Gene: WBGene00020560
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| WBGene00020560 | SMap | S_parent | Sequence | T19C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T19C3.2 | |||||||
| Molecular_name | T19C3.2 | ||||||||
| T19C3.2.1 | |||||||||
| CE53863 | |||||||||
| Other_name | CELE_T19C3.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T19C3.2 | ||||||||
| DB_info | Database | AceView | gene | 3B234 | |||||
| WormQTL | gene | WBGene00020560 | |||||||
| WormFlux | gene | WBGene00020560 | |||||||
| NDB | locus_tag | CELE_T19C3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020560|UniProtKB=Q10008 | |||||||
| family | PTHR37443 | ||||||||
| NCBI | gene | 175215 | |||||||
| RefSeq | protein | NM_001377916.1 | |||||||
| SwissProt | UniProtAcc | Q10008 | |||||||
| TREEFAM | TREEFAM_ID | TF320248 | |||||||
| UniProt_GCRP | UniProtAcc | Q10008 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (67) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00010972 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021850 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including NSM; germline precursor cell; interfacial epithelial cell; rectal gland cell; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-two chemicals including hydrogen sulfide; Nitric Oxide; and methylmercury hydroxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Uncharacterized protein T19C3.2-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19C3.2 | |||||||
| Corresponding_CDS_history | T19C3.2:wp274 | ||||||||
| Corresponding_transcript | T19C3.2.1 | ||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf650804 | ||||||||
| WBsf666421 | |||||||||
| WBsf991104 | |||||||||
| WBsf1014097 | |||||||||
| WBsf226113 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053505 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006673 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018824 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011233 | ||||||||
| Expr1038962 | |||||||||
| Expr1157072 | |||||||||
| Expr2006245 | |||||||||
| Expr2024463 | |||||||||
| Drives_construct | WBCnstr00025051 | ||||||||
| Construct_product | WBCnstr00025051 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (248) | |||||||||
| Interaction | WBInteraction000145360 | ||||||||
| WBInteraction000183012 | |||||||||
| WBInteraction000250148 | |||||||||
| WBInteraction000267406 | |||||||||
| WBInteraction000342337 | |||||||||
| WBInteraction000444482 | |||||||||
| Map_info | Positive | Positive_clone | T19C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -26.5178 | |||||||
| Reference | WBPaper00060662 | ||||||||
| Method | Gene |
