WormBase Tree Display for Gene: WBGene00021671
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| WBGene00021671 | SMap | S_parent | Sequence | Y48G1BM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | Y48G1BM.6 | |||||||
| Molecular_name | Y48G1BM.6a | ||||||||
| Y48G1BM.6a.1 | |||||||||
| CE54310 | |||||||||
| Y48G1BM.6d | |||||||||
| Other_name | CELE_Y48G1BM.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y48G1BM.6 | ||||||||
| DB_info | Database | AceView | gene | 1A708 | |||||
| WormQTL | gene | WBGene00021671 | |||||||
| WormFlux | gene | WBGene00021671 | |||||||
| NDB | locus_tag | CELE_Y48G1BM.6 | |||||||
| NCBI | gene | 190039 | |||||||
| RefSeq | protein | NR_175829.1 | |||||||
| NM_001393046.1 | |||||||||
| RNAcentral | URSid | URS000242F08F | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2009 16:50:33 | WBPerson1849 | Event | Acquires_merge | WBGene00021670 | ||||
| 3 | 10 Nov 2020 23:53:02 | WBPerson51134 | Event | Split_into | WBGene00306121 | ||||
| Acquires_merge | WBGene00021670 | ||||||||
| Split_into | WBGene00306121 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00308591 | ||||||||
| WBVar01573454 | |||||||||
| WBVar01573455 | |||||||||
| WBVar01402878 | |||||||||
| WBVar01403932 | |||||||||
| WBVar01942819 | |||||||||
| WBVar01639901 | |||||||||
| WBVar01639902 | |||||||||
| WBVar01555009 | |||||||||
| WBVar01704467 | |||||||||
| WBVar02005822 | |||||||||
| WBVar00307378 | |||||||||
| WBVar00307379 | |||||||||
| WBVar00605756 | |||||||||
| WBVar00605757 | |||||||||
| WBVar00605758 | |||||||||
| WBVar00605759 | |||||||||
| WBVar00605760 | |||||||||
| WBVar00605761 | |||||||||
| WBVar00605762 | |||||||||
| WBVar00605763 | |||||||||
| WBVar00605764 | |||||||||
| WBVar00605765 | |||||||||
| WBVar00605766 | |||||||||
| WBVar00605767 | |||||||||
| WBVar00605768 | |||||||||
| WBVar00605769 | |||||||||
| WBVar00605770 | |||||||||
| WBVar00302573 | |||||||||
| WBVar00605771 | |||||||||
| WBVar01499786 | |||||||||
| WBVar00605772 | |||||||||
| WBVar00605773 | |||||||||
| WBVar01499605 | |||||||||
| WBVar00605774 | |||||||||
| WBVar00605775 | |||||||||
| WBVar00605776 | |||||||||
| WBVar00605777 | |||||||||
| WBVar00605778 | |||||||||
| WBVar00605779 | |||||||||
| WBVar01929849 | |||||||||
| WBVar00068649 | |||||||||
| WBVar01499619 | |||||||||
| WBVar00323720 | |||||||||
| WBVar00252955 | |||||||||
| WBVar00323721 | |||||||||
| WBVar01529563 | |||||||||
| WBVar00323722 | |||||||||
| WBVar01529564 | |||||||||
| WBVar00323723 | |||||||||
| WBVar01529565 | |||||||||
| WBVar00323724 | |||||||||
| WBVar01529566 | |||||||||
| WBVar02125876 | |||||||||
| WBVar00323725 | |||||||||
| WBVar01278363 | |||||||||
| WBVar01529567 | |||||||||
| WBVar01529568 | |||||||||
| WBVar00323726 | |||||||||
| WBVar00323727 | |||||||||
| WBVar01529569 | |||||||||
| WBVar00323728 | |||||||||
| WBVar00323729 | |||||||||
| WBVar00067459 | |||||||||
| WBVar01992669 | |||||||||
| WBVar00147081 | |||||||||
| WBVar00299308 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Enriched in neurons and retrovesicular ganglion based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including multi-walled carbon nanotube; Alovudine; and metformin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G1BM.6a | |||||||
| Corresponding_CDS_history | Y48G1BM.6:wp199 | ||||||||
| Y48G1BM.6:wp214 | |||||||||
| Y48G1BM.6:wp265 | |||||||||
| Corresponding_transcript | Y48G1BM.6d | ||||||||
| Y48G1BM.6a.1 | |||||||||
| Corresponding_pseudogene_history | Y48G1BM.6:wp279 | ||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055472 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056947 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056946 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058283 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019988 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013491 | ||||||||
| Expr1039488 | |||||||||
| Expr1160392 | |||||||||
| Expr2007682 | |||||||||
| Expr2025924 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (154) | |||||||||
| Interaction | WBInteraction000373465 | ||||||||
| WBInteraction000373467 | |||||||||
| WBInteraction000373469 | |||||||||
| Map_info | Positive | Positive_clone | Y48G1BM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -19.1182 | |||||||
| Remark | [2020-11-10T23:53:02.969Z WBPerson51134] Gene Split creating Y48G1BM.10 WBGene00306121: Seems to be a fusion of CDS Y48G1BM.6 and CDS Y48G1BM.10 | Curator_confirmed | WBPerson51134 | ||||||
| [2020-11-10T23:54:39.038Z WBPerson51134] Gene Updated: Biotype changed to CDS | Curator_confirmed | WBPerson51134 | |||||||
| Method | Gene |
