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WormBase Tree Display for Gene: WBGene00021595

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Name Class

WBGene00021595SMapS_parentSequenceY46E12BL
IdentityVersion1
NameSequence_nameY46E12BL.2
Molecular_nameY46E12BL.2a
Y46E12BL.2a.1
CE27472
Y46E12BL.2a.2
Y46E12BL.2b
Other_nameCELE_Y46E12BL.2Accession_evidenceNDBBX284602
Public_nameY46E12BL.2
DB_infoDatabaseAceViewgene2P527
WormQTLgeneWBGene00021595
WormFluxgeneWBGene00021595
NDBlocus_tagCELE_Y46E12BL.2
PanthergeneCAEEL|WormBase=WBGene00021595|UniProtKB=Q965N8
familyPTHR21576
NCBIgene266878
RefSeqproteinNR_131432.1
NM_064918.8
TrEMBLUniProtAccQ965N8
UniProt_GCRPUniProtAccQ965N8
RNAcentralURSidURS00004C7A2D
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (235)
RNASeq_FPKM (74)
GO_annotation00090514
OrthologWBGene00039597Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00057531Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00146375Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122579Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00149629Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00226838Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10388Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6288Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10542Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16839Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17189Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27242Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3619Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g4281Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17927Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g2570Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21582Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g5056Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00375.g9961Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13358.g24192Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y46E12BL.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00021.g1258Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_23218Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005850Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02638Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19266Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20078000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6680Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247399Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00096327Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00289204Trichuris murisFrom_analysisWormBase-Compara
SGD:S000005933Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
FB:FBgn0030504Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050706-182Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
HGNC:29100Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
MGI:2147437Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
RGD:1591867Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of human RRP12 (ribosomal RNA processing 12 homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY46E12BL.2a
Corresponding_transcriptY46E12BL.2b
Y46E12BL.2a.1
Y46E12BL.2a.2
Other_sequence (48)
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00117257Inferred_automaticallyRNAi_primary
WBRNAi00056663Inferred_automaticallyRNAi_primary
Expr_patternExpr1016590
Expr1039447
Expr1160135
Expr2007578
Expr2025814
Microarray_results (19)
Expression_cluster (113)
Interaction (138)
Map_infoPositivePositive_cloneY46E12BLInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII24.6344
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00061889
MethodGene