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WormBase Tree Display for Gene: WBGene00039597

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Name Class

WBGene00039597SMapS_parentSequencecb25.fpc4206a
IdentityVersion1
NameSequence_nameCBG20655
Molecular_nameCBG20655
CBG20655.1
CBP04862
Other_nameCBG_20655Accession_evidenceNDBHE600991
Public_nameCBG20655
DB_infoDatabaseNDBlocus_tagCBG_20655
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000218.3954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.1328From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.2037From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.7994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.3654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
22.7995From_analysisRNASeq.briggsae.WBls:0000002.control_median
23.441From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000335.1839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
36.4837From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
37.7835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
33.3643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
35.4439From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000427.3359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
27.9818From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
28.6277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.0187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
28.0836From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
28.2642From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.2914From_analysisRNASeq.briggsae.WBls:0000027.control_mean
21.7231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.27202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.879From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.1456From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.3011From_analysisRNASeq.briggsae.WBls:0000027.control_median
25.7084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003525.044From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003825.3736From_analysisRNASeq.briggsae.WBls:0000038.control_mean
29.2495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
30.4243From_analysisRNASeq.briggsae.WBls:0000038.control_median
31.5991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
33.0843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.56132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004123.6956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
32.4013From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.9835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
34.1547From_analysisRNASeq.briggsae.WBls:0000041.control_median
35.3258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
37.6002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
26.9862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
32.2063From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.6465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006330.1114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
30.289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
30.9162From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
31.9481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
33.6223From_analysisRNASeq.briggsae.WBls:0000063.control_mean
44.8468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
31.1936From_analysisRNASeq.briggsae.WBls:0000063.control_median
31.4711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
33.2638From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010126.607From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
29.2495From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.0922From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
28.9386From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Armadillo-type fold; Uncharacterised domain NUC173; and NUC173 domain. Is an ortholog of C. elegans Y46E12BL.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20655
Corresponding_CDS_historyCBG20655:bp194
Corresponding_transcriptCBG20655.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1050765
Microarray_resultsGPL8303_CB6_WBGene00039597_A
GPL8303_CB6_WBGene00039597_B
GPL14143_CBG20655_2859-2918_0.762_88_C
GPL14143_CBG20655_3682-3741_0.806_3_B
GPL14143_CBG20655_3913-3972_0.800_8_A
MethodGene