WormBase Tree Display for Gene: WBGene00021544
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| WBGene00021544 | SMap | S_parent | Sequence | Y43B11AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y43B11AR.3 | |||||||
| Molecular_name | Y43B11AR.3 | ||||||||
| Y43B11AR.3.1 | |||||||||
| CE49239 | |||||||||
| Other_name | Y43B11AR.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y43B11AR.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y43B11AR.3 | ||||||||
| DB_info | Database | AceView | gene | 4H846 | |||||
| WormQTL | gene | WBGene00021544 | |||||||
| WormFlux | gene | WBGene00021544 | |||||||
| NDB | locus_tag | CELE_Y43B11AR.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021544|UniProtKB=Q9N3X3 | |||||||
| family | PTHR13195 | ||||||||
| NCBI | gene | 177480 | |||||||
| RefSeq | protein | NM_068701.8 | |||||||
| TREEFAM | TREEFAM_ID | TF320759 | |||||||
| TrEMBL | UniProtAcc | Q9N3X3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3X3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| Strain | WBStrain00031855 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00125874 | ||||||||
| 00125875 | |||||||||
| 00125876 | |||||||||
| 00125877 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity and pseudouridine synthase activity. Predicted to be involved in pseudouridine synthesis. Is an ortholog of human TRUB2 (TruB pseudouridine synthase family member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y43B11AR.3 | |||||||
| Corresponding_CDS_history | Y43B11AR.3:wp154 | ||||||||
| Y43B11AR.3:wp225 | |||||||||
| Y43B11AR.3:wp240 | |||||||||
| Corresponding_transcript | Y43B11AR.3.1 | ||||||||
| Other_sequence | Dviv_isotig18252 | ||||||||
| CRC08250_1 | |||||||||
| Oden_isotig22328 | |||||||||
| CBC02395_1 | |||||||||
| CR05592 | |||||||||
| CJC16538_1 | |||||||||
| Acan_isotig13111 | |||||||||
| Tcir_isotig16987 | |||||||||
| Associated_feature | WBsf230217 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00056458 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037031 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013795 | ||||||||
| Expr1039424 | |||||||||
| Expr1159930 | |||||||||
| Expr2007473 | |||||||||
| Expr2025710 | |||||||||
| Drives_construct | WBCnstr00024506 | ||||||||
| Construct_product | WBCnstr00024506 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction | WBInteraction000031337 | ||||||||
| WBInteraction000226420 | |||||||||
| WBInteraction000226421 | |||||||||
| WBInteraction000249158 | |||||||||
| WBInteraction000507397 | |||||||||
| Map_info | Positive | Positive_clone | Y43B11AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.28829 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00054284 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
