WormBase Tree Display for Gene: WBGene00021541
expand all nodes | collapse all nodes | view schema
| WBGene00021541 | SMap | S_parent | Sequence | Y42H9B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y42H9B.3 | |||||||
| Molecular_name | Y42H9B.3 | ||||||||
| Y42H9B.3.1 | |||||||||
| CE25279 | |||||||||
| Other_name | Y42H9B.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y42H9B.d | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y42H9B.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y42H9B.3 | ||||||||
| DB_info | Database | AceView | gene | 4I774 | |||||
| WormQTL | gene | WBGene00021541 | |||||||
| WormFlux | gene | WBGene00021541 | |||||||
| NDB | locus_tag | CELE_Y42H9B.3 | |||||||
| NCBI | gene | 189844 | |||||||
| RefSeq | protein | NM_068939.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315683 | |||||||
| TrEMBL | UniProtAcc | Q9N3X7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3X7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in GLR; body wall muscle cell; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by eleven chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y42H9B.3 | |||||||
| Corresponding_transcript | Y42H9B.3.1 | ||||||||
| Other_sequence | CR08826 | ||||||||
| CBC06158_1 | |||||||||
| CBC06251_1 | |||||||||
| CR08827 | |||||||||
| CRC10608_1 | |||||||||
| CJC17737_1 | |||||||||
| FD517647.1 | |||||||||
| CSC01655_1 | |||||||||
| Associated_feature | WBsf651973 | ||||||||
| WBsf997099 | |||||||||
| WBsf997100 | |||||||||
| WBsf997101 | |||||||||
| WBsf997102 | |||||||||
| WBsf1017781 | |||||||||
| WBsf1017782 | |||||||||
| WBsf230365 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037029 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00072307 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056452 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072306 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020072 | ||||||||
| Expr1039421 | |||||||||
| Expr1159925 | |||||||||
| Expr2007470 | |||||||||
| Expr2025707 | |||||||||
| Drives_construct | WBCnstr00024508 | ||||||||
| Construct_product | WBCnstr00024508 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (130) | |||||||||
| Map_info | Positive | Positive_clone | Y42H9B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.5787 | |||||||
| Method | Gene |
