WormBase Tree Display for Gene: WBGene00021506

WBGene00021506 SMap: S_parent: Sequence: Y41D4A
  Identity: Version: 1
    Name: Sequence_name: Y41D4A.4
      Molecular_name (15)
      Other_name: CELE_Y41D4A.4 Accession_evidence: NDB BX284604
      Public_name: Y41D4A.4
    DB_info: Database: AceView gene 4C515
        WormQTL gene WBGene00021506
        WormFlux gene WBGene00021506
        NDB locus_tag CELE_Y41D4A.4
        Panther gene CAEEL|WormBase=WBGene00021506|UniProtKB=U4PRX8
          family PTHR10766
        NCBI gene 176983
        RefSeq protein NM_067729.6
            NM_001380063.1
            NM_001380061.2
            NM_001380064.1
            NM_001380062.2
        TrEMBL UniProtAcc Q95Y24
            U4PBU4
            U4PML6
            U4PRX8
            U4PC73
        UniProt_GCRP UniProtAcc U4PRX8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (131)
    Strain: WBStrain00002275
      WBStrain00002276
      WBStrain00002398
    RNASeq_FPKM (74)
    GO_annotation: 00089554
      00089555
      00089556
      00089557
      00125841
    Ortholog (36)
    Paralog: WBGene00006472 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00014119 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in protein localization to membrane. Predicted to be located in membrane. Expressed in head and tail. Is an ortholog of human TM9SF3 (transmembrane 9 superfamily member 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y41D4A.4a
      Y41D4A.4b
      Y41D4A.4c
      Y41D4A.4d
      Y41D4A.4e
    Corresponding_transcript: Y41D4A.4a.1
      Y41D4A.4b.1
      Y41D4A.4c.1
      Y41D4A.4d.1
      Y41D4A.4e.1
    Other_sequence: MH10344
      SSC03897_1
      AS17431
      MH06351
      RSC03997_1
      HGC06324_1
      Hbac_isotig02792
      MJC00143_1
      JI464517.1
      RS08362
      CB038004.1
      JI482777.1
      EY468877.1
      ACC02457_1
      Tcol_isotig11644
      FC543580.1
      Name_isotig02188
      FK807199.1
      EX828232.1
      Acan_isotig08503
      JI476538.1
      FC551333.1
      Dviv_isotig16066
      JI166180.1
      FC551244.1
      MJ01526
      FC539052.1
      JI477764.1
      EY462801.1
      EY462589.1
      MH06352
      EY458955.1
      HG06076
      SR03194
      PPC04488_1
      TDC01129_1
      PPC02517_1
      SS02597
      FC552796.1
      MHC02770_1
      DAC02667_1
      EY467899.1
      BXC02214_1
      MH04673
      MA01709
      FC550775.1
      SRC05751_1
      EY466127.1
      ACC28469_1
      HS00575
      MJ01254
      FC552975.1
      EX549473.1
      XI04081
      EY458965.1
      EX564451.1
      FC554937.1
      EY464986.1
      CBC08610_1
      Oden_isotig18644
      FC550896.1
      FC545707.1
      Tcir_isotig06615
      DA04827
      PT04515
      Hbac_isotig05584
      AS10741
      XIC02085_1
      FK806987.1
      HSC00103_1
      FC551805.1
      EX552913.1
      BXC01307_1
      FC542202.1
      EX536289.1
      HS00315
      EY461046.1
      BM567596.1
    Associated_feature: WBsf645817
      WBsf645818
      WBsf659927
      WBsf659928
      WBsf659929
      WBsf659930
      WBsf995521
      WBsf1016780
      WBsf227975
  Experimental_info: RNAi_result: WBRNAi00056371 Inferred_automatically: RNAi_primary
      WBRNAi00020487 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram487
      Chronogram855
      Chronogram1443
      Expr6963
      Expr6964
      Expr1014160
      Expr1039398
      Expr1159858
      Expr2007437
      Expr2025673
    Drives_construct: WBCnstr00002975
      WBCnstr00002976
      WBCnstr00004483
    Microarray_results (29)
    Expression_cluster (103)
    SAGE_tag: SAGE:tatccaaagt Strand: Antisense
      SAGE:ggaatcttcg Strand: Sense
        Unambiguously_mapped
      SAGE:accggcaccatcggata Strand: Sense
        Unambiguously_mapped
      SAGE:agtccgagagcggcggc Strand: Antisense
      SAGE:accggcacca Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000290719
      WBInteraction000581223
  Map_info: Positive: Positive_clone: Y41D4A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -16.0664
  Reference: WBPaper00026601
    WBPaper00038491
    WBPaper00055090
    WBPaper00061547
  Method: Gene