WormBase Tree Display for Gene: WBGene00006472

WBGene00006472 SMap: S_parent: Sequence: F08F1
  Identity: Version: 1
    Name: CGC_name: tag-123 Person_evidence: WBPerson201
      Sequence_name: F08F1.7
      Molecular_name: F08F1.7
        F08F1.7.1
        CE09254
      Other_name: CELE_F08F1.7 Accession_evidence: NDB BX284606
      Public_name: tag-123
    DB_info: Database: AceView gene XJ38
        WormQTL gene WBGene00006472
        WormFlux gene WBGene00006472
        NDB locus_tag CELE_F08F1.7
        Panther gene CAEEL|WormBase=WBGene00006472|UniProtKB=O17388
          family PTHR10766
        NCBI gene 181096
        RefSeq protein NM_077028.8
        TREEFAM TREEFAM_ID TF300394
        TrEMBL UniProtAcc O17388
        UniProt_GCRP UniProtAcc O17388
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tag
    Allele (56)
    Strain: WBStrain00001384
      WBStrain00035758
    RNASeq_FPKM (74)
    GO_annotation: 00029705
      00029706
      00029707
      00029708
      00114121
    Contained_in_operon: CEOPX100
    Ortholog (41)
    Paralog: WBGene00021506 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00014119 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in protein localization to membrane. Predicted to be located in membrane. Expressed in several structures, including anterior gonad arm; head; pharyngeal muscle cell; rectal epithelium; and vulva. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia. Is an ortholog of human TM9SF2 (transmembrane 9 superfamily member 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:9952 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11865)
  Molecular_info: Corresponding_CDS: F08F1.7
    Corresponding_transcript: F08F1.7.1
    Other_sequence (70)
    Associated_feature: WBsf654214
      WBsf982213
      WBsf1006145
      WBsf1023410
      WBsf237682
      WBsf237683
  Experimental_info: RNAi_result: WBRNAi00062739 Inferred_automatically: RNAi_primary
      WBRNAi00030652 Inferred_automatically: RNAi_primary
      WBRNAi00062740 Inferred_automatically: RNAi_primary
      WBRNAi00044012 Inferred_automatically: RNAi_primary
      WBRNAi00012901 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3292
      Expr5682
      Expr13124
      Expr1021604
      Expr1032641
      Expr1147979
      Expr2017225
      Expr2035361
    Drives_construct: WBCnstr00002275
      WBCnstr00004283
      WBCnstr00011289
      WBCnstr00034344
    Construct_product: WBCnstr00034344
    Microarray_results (20)
    Expression_cluster (124)
    Interaction (91)
  Map_info: Map: X Position: -0.101605 Error: 0.010635
    Positive: Positive_clone: F08F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4919
    Pseudo_map_position
  Reference: WBPaper00028483
    WBPaper00028985
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene