WormBase Tree Display for Gene: WBGene00021496

WBGene00021496 SMap: S_parent: Sequence: Y40C5A
  Identity: Version: 2
    Name: CGC_name: daf-42 Person_evidence: WBPerson360
            WBPerson31239
      Sequence_name: Y40C5A.3
      Molecular_name (51)
      Other_name: CELE_Y40C5A.3 Accession_evidence: NDB BX284604
      Public_name: daf-42
    DB_info: Database: AceView gene 4I100
        WormQTL gene WBGene00021496
        WormFlux gene WBGene00021496
        NDB locus_tag CELE_Y40C5A.3
        NCBI gene 177507
        RefSeq protein (17)
        TREEFAM TREEFAM_ID TF342754
        TrEMBL UniProtAcc (17)
        UniProt_GCRP UniProtAcc W6RTL3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 May 2019 14:10:26 WBPerson1983 Name_change: CGC_name: daf-42
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: daf
    Allele (142)
    RNASeq_FPKM (74)
    Ortholog (19)
    Structured_description: Automated_description: Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapapapa; ABalapappaa; and anterior ganglion (post) based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by four chemicals including Zidovudine; sucrose; and stearic acid based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS (17)
    Corresponding_CDS_history: Y40C5A.3:wp203
      Y40C5A.3:wp208
      Y40C5A.3a:wp241
      Y40C5A.3b:wp241
    Corresponding_transcript (17)
    Other_sequence (27)
    Associated_feature: WBsf651906
      WBsf668014
      WBsf996941
      WBsf996942
      WBsf1017688
      WBsf1017689
  Experimental_info: RNAi_result: WBRNAi00020449 Inferred_automatically: RNAi_primary
      WBRNAi00020450 Inferred_automatically: RNAi_primary
      WBRNAi00020451 Inferred_automatically: RNAi_primary
      WBRNAi00056325 Inferred_automatically: RNAi_primary
      WBRNAi00020447 Inferred_automatically: RNAi_primary
      WBRNAi00059962 Inferred_automatically: RNAi_primary
      WBRNAi00059961 Inferred_automatically: RNAi_primary
      WBRNAi00059963 Inferred_automatically: RNAi_primary
      WBRNAi00020446 Inferred_automatically: RNAi_primary
      WBRNAi00059964 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr16428
      Expr1024795
      Expr1039394
      Expr1159813
      Expr2007417
      Expr2025653
    Drives_construct: WBCnstr00043013
    Construct_product: WBCnstr00043013
    Microarray_results (17)
    Expression_cluster (108)
  Map_info: Map: IV Position: 3.32865
    Positive: Positive_clone: Y40C5A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00057489
    WBPaper00062835
    WBPaper00065378
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene